SimpleSearch - Line and FST details
Line specific information
Line ID | 852G02 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N481770) |
Segregation Analysis | 50:14:11 |
Confirmed for Hit | At1g68510 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F13N6
Sequence (A. th genome BLAST matches underlined) | >15-K025757-022-852-G02-8409 GNAGCCATTTACAATTGAATATATCCTGAGTATGAAGCCAAGTATGAAGCCATCGATTGA CCGATAACTACAAGTTATTAGTTATACCAAAATGTTATGTAAAATATTAAAGAGAATTGA TTGTATACTGATTTTCAAATATATTTGTCAAATCCACCGTATGGGATCCTCCCTATAGTG AG |
GenBank Accession | CR402167 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:21157882 - go to primer design |
BLAST e Value | 6e-48 |
Hit Clone Code (BAC ID) | F13N6 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At1g68510
Sequence (A. th genome BLAST matches underlined) | >15-K025844-022-852-G02-8409 NNTTTGGAGGTATTCGGACATGAGCCTTTACATTGAATATATCCTGATAATTTAAACCGA AGGCGGGAAACGACTATCTGATCCCCGGGTATGTTATCCTCCCTATAGTGAGATGTACAA TATTCCCCTCTAGTGAAAGTAACACTGCTTTTCTGTATATGTTTGTATAAACGCCTGTAC TGAACCAATCTTTTTTCTGAGATTTTCTCCCATACTTGAAATCAGTTAAGTAATTCCATC TCTTTCACTTACCACTCATGAATAACTTCTTCCTTATAAATTCAAATTGTTCACAACTTC CTTGAGTTCCATTTCCGAACACAAACACACATCATACGTATATTTGTCACTAATAAACAT ATAAAGGAATATGAGAATCAGCTGCAACGGGTGTAGGGTTCTACGCAAAGGTTGCAACCA AGATTGCACCATTCGACCATGCCTTCAATGGATCAAATCCGCAGACTCTCAAGCCAATGC TACACTCTTCCTTGCTAAGTTCTACGGTCGAGCCGGTCTTCTTAACCTCATCGAA |
GenBank Accession | CR402168 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:25706906 - go to primer design |
BLAST e Value | 4e-157 |
Hit Clone Code (BAC ID) | T26J14 |
Hit Gene Code | At1g68510 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | LOB domain-containing protein 42 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |