SimpleSearch - Line and FST details


Line specific information

 
Line ID 854D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N481925)
Segregation Analysis 50:50:30
Confirmed for Hit At2g46020
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g46020

 
Sequence (A. th genome BLAST matches underlined) 
>04-K025846-022-854-D01-8409
CCATTTACGATGAGAATAGATCCCGGGGGATTTTCGTCTGCATACAGAACTCGATACCTT
GGCTGCCGTCTTGTTACACGCATATATTATGTTGATATGGAATCCTCCCTATGGTGAGTG
CACCGCGTCCACCATTCCCCCCAACACGAGGAGCAGACTGGCCTTAGATAATGAACACAT
GAGGACTGTGAGACTCCCTCCGACCGATGGCATAGCGATATAAGCAGTCAATCCTGGAGA
CCCACCGACTCCCCTGGCACGCGCCCATCACTATCGCAAAGTATTTGAACGCATGTATGG
GATCCTCCCTACATCGAGTTCACCAGAACAGCATTGGGAACGATGATCAAATGCAGCCCC
CAATTCCCTTTACGCACCATACCGTAAGCAATCATTGCCATTACCTGTATGGGAACCTCC
CTATATTGAGAAAAACGCTGCGGACATCCCAATGGCCCCCCCTATGGGATCCCCCCTATA
GTGAGTCGTAATACTCCCTGGGCTACCCTGAATTGGTAGCTTAAT
GenBank Accession CR402363 [GenBank]
Graphic View Graphic view of gene At2g46020
Predicted Position of Insertion Chr2:18927735 - go to primer design
BLAST e Value 1e-15
Hit Clone Code (BAC ID) T3F17
Hit Gene Code At2g46020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transcription regulatory protein SNF2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR402363 [GenBank]


Last Updated on 10.06.2021 13:37