SimpleSearch - Line and FST details
Line specific information
| Line ID | 854G03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N791010) |
| Segregation Analysis | 50:5:3 |
| Confirmed for Hit | At4g29410 |
| Parent of DUPLO pair | 1665 |
| Parent of pair(s) | none |
| Note |
Gene hit At4g29410
| Sequence (A. th genome BLAST matches underlined) | >11-K110306-0022-854-G03C-8409 CGGAATTGAGCCATTTACTTGCTTCCTATTAGGACATGACCCAATAGCATGTAACCAACA AAAAGATAGTCATCAATTCAACAAGTTGTTAATTTTCCCAATTACATTTAGCTAGACATA TAAAGGTAATGACTTGTGTTCATATCAACAGATTCAACAAAAGAACAAACTTGAGATAAA TCTAGAGTAAGCAACAGTTGTGTATTACCAGAGTGCTTGTACGAGTTGATGTTGACGAGG TTGTTGCTCTCTTTGCTGAACTGAACCTTGGCATTACCTCTACCGAATTGCTTCACCAAG AAACAGTTGTTTCTCTTCACGATCTCCCAGATCAACTGTCCTGGAACTGTGGCCATTTCG AGCTCCTTCACTGATTATTGAAGAAGAAAGCATTTAGTAACACAACATATATGAAGCGGT AAAACAAGGGCTACACAGATTGAAGAACAAAGAACGGCAAATTGGTTTGTAAAGAGATGA TTCAAGCTCACCTTGATATTAGCAGACCTAGATGACGGCGGTAAAGAGAAGAGAACGAGA CTCGTGCCGGAGTTAAGTTATGATTTATGTCGATGCGTTAATATATATACATTCTCTGCA AAACCCTAGTTTGGTTCTCGGAGGCAATGTTTATAAGT |
| GenBank Accession | HE664984 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:14469647 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F17A13 |
| Hit Gene Code | At4g29410 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ribosomal L28e protein family |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g47010
| Sequence (A. th genome BLAST matches underlined) | >23-K025755-022-854-G03-8409 CATGTATAATTGAATATATCCTGTCGCATAGAGGAGAGTCCTACTAGTGGCCCTTATGGA TTGCCCGACCTTGATAGAGCTGATGTATGCCATCCTTAAGTGTATCCTCCATATATGAAG ACTGTGTTTTGCGCCTTTAATAAGAGATTTTTATTATTATTACCTGAGAGGTTCTCGTTT GGGACCCAAGTATTGTTGCTTAGGAGGGGGGGGGGGGGGCACCCTACTTATAATCATATC ACTAGACACATTACTCTATTNTATAATTAAAATTAACAATACCTTAACCACTTATATTAA TAAAATAAAATTTAAAATACCTACACACATACCATTATTATATTAATTAACTAAAATAAC TCTTATAATATTTATCACCCTATTTTTCAAACATTTATTATCTAATATAAAAATATCTAA CATAATGGGGGGGGGGAAAACACTTCATGTTACATATCCAATTCTTACGTATAACCGTTG CTTAGAATTTGACGAAGAACTAATTACAGACATATGTGACATTATATTTC |
| GenBank Accession | CR402407 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19074563 - go to primer design |
| BLAST e Value | 2e-11 |
| Hit Clone Code (BAC ID) | MQD22 |
| Hit Gene Code | At5g47010 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RNA helicase |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 790A12 |
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Last Updated on 10.06.2021 13:37 |
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