SimpleSearch - Line and FST details


Line specific information

 
Line ID 859H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N482462)
Segregation Analysis 50:35:23
Confirmed for Hit At5g63660
Parent of DUPLO pair none
Parent of pair(s) 88875, 88879

Gene hit At5g63660

 
Sequence (A. th genome BLAST matches underlined) 
>80-K025971-022-859-H10-8409
AATGAGCATTTTAAATTGGAAATTAGACTATGTTCTTTTTCTTAAGAGTGTAGAGTTTAT
TTGTGTAGTTAAATAGAGGAGATCATTGTGGGGTGAAGGAAAGACTTGCCAATCGAAAAG
ACACCACTTCACATACATGCTGATGGGATCCTCCTGTATCTTGAGATATAATCCTAATGA
TATTGATTGCTTGTTAAATGCTAAAAACGTAAGTGGAGCAAGAGCTACTTCTCCATGACT
CCATATATATAGATTCAAGTGTAGGTTTCGTTAGGGTTTCTTTTTGGGGCCACATAGCGT
ATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNNNNNNNNTTNNNNNNNNCCTAGGGAA
GCGCCCAAATGTGGGNCTCACTCGTGAATTTTTTACTAGAAGCCCCCATTTAGGACTGCA
GGAGGAGAATACCCGGACCTATTTTTCAAATCACACAAAA
GenBank Accession CR403023 [GenBank]
Graphic View Graphic view of gene At5g63660
Predicted Position of Insertion Chr5:25485818 - go to primer design
BLAST e Value 8e-69
Hit Clone Code (BAC ID) MBK5
Hit Gene Code At5g63660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Scorpion toxin-like knottin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR403023 [GenBank]


Last Updated on 10.06.2021 13:37