SimpleSearch - Line and FST details


Line specific information

 
Line ID 861F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N482631)
Segregation Analysis 100:28:20
Confirmed for Hit At3g53570
Parent of DUPLO pair none
Parent of pair(s) 37468, 81914

Gene hit At3g53570

 
Sequence (A. th genome BLAST matches underlined) 
>86-K025974-022-861-F11-8409
ATTTGTTGTTGTAGAAAACTTTGACTCCATAATGTGATTCTTAAGTTACACAGTCTTTCA
ATCTCTAATCTGTTACGTTACCCACACTTTATCATGGAGGTTTACATTGACATGCCTCTT
CTATTGTGCGTGCAGATCAAATTCTCAGCAAAATGGGTGAAGGTTAGTCATCTCTTGCGA
AAATGTTTATATAATCATTATGATTAGATTATTCTGTTTTTCAAAGTGTAGGAGAAATAT
GTTTATTTGGTCGCCAGTTATCTTAATCAATTGGATTGTATTTTGGCAGGTATGGGATCC
TCCCTATAGTGAG
GenBank Accession CR403232 [GenBank]
Graphic View Graphic view of gene At3g53570
Predicted Position of Insertion Chr3:19863657 - go to primer design
BLAST e Value 2e-125
Hit Clone Code (BAC ID) F4P12
Hit Gene Code At3g53570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine/threonine-protein kinase AFC1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F4P13

 
Sequence (A. th genome BLAST matches underlined) 
>86-K025975-022-861-F11-8409
AATTGAATATATCCTGACCAGGAAGGCCATTATAGAATATGTTTGGGTAAACAAAATTGG
GAACTAAACCACTCGCAAACTCCGGACCATAGTATGGGATCCTCCCTATAGTGAGAATAA
TTCATATCCCCCGGATGAGATCTGTTTCCAAGTCCTCTCGCTAAAGAAAGTGGACCCCAG
AGAGCTCAGAAAAGTCCACTTCCGATTTGTAAACAAGCCAATCACTTTCGATTTACCACA
ATTGCCCCTTTTCAAGATTTCGTTGAAAAACTTTTGTTAGTTTTTAAGTAGTATGGGATC
CTCCCTATAGTGAG
GenBank Accession CR403233 [GenBank]
Graphic View Graphic view of sequence CR403233 of line 861F11
Predicted Position of Insertion Chr3:184938 - go to primer design
BLAST e Value 4e-86
Hit Clone Code (BAC ID) F4P13
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37