SimpleSearch - Line and FST details


Line specific information

 
Line ID 863H08
Vector Used pAC161
Line Availability available as T3 set from NASC (N482844)
Segregation Analysis 50:32:24
Confirmed for Hit At3g55500
Parent of DUPLO pair none
Parent of pair(s) 6477, 6482, 6491, 6496, 6498, 6505, 6513, 6526, 8879, 90662, 90710, 90725, 90766, 90797, 90808, 90818, 90833, 90834, 90835, 90836, 90837

Gene hit At3g55500

 
Sequence (A. th genome BLAST matches underlined) 
>64-K025978-022-863-H08-8409
AGCCTTTACATTGAATATATCCTGAGAAGACTCCAGGGATTCCGGCGTCCGTGAAGCTCA
AGAGAAGGAAGAGTGGGAATATGGTTAAGAGAATCCATGGATTGATTGCCATTTTGGTAA
GTATTTTTAATTGAATTGGAGAAAGCTTGAGAAAATTGTTAGACTAGAAGGCTTAGAGAG
GAACTTGAGGATGGTGGAAAATACACTTGTGAAGATCGCTATTTATATTGGTGGAGAGAA
CTCCCAAGTTAGAGAAATAGATGGTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNN
NNNNNTCTNNNGTATNNTCCTATGGAATCGCCCCAAACACGGCCCCAATGATGCCGGTCC
TCAGGAGGCCCTAGATTTGAAGGTGTTTCTACACCCCCCGAGTTACCTAGTCCGGGGGGG
CGAACATATGTCGTACCTCTCCCACCCAAG
GenBank Accession CR403518 [GenBank]
Graphic View Graphic view of gene At3g55500
Predicted Position of Insertion Chr3:20576011 - go to primer design
BLAST e Value 3e-127
Hit Clone Code (BAC ID) T22E16
Hit Gene Code At3g55500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation expansin A16
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37