SimpleSearch - Line and FST details


Line specific information

 
Line ID 864H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N482934)
Segregation Analysis N/A (line seemingly not resistant, T2 plants grown without drug)
Confirmed for Hit At4g37870
Parent of DUPLO pair 12292
Parent of pair(s) none

Gene hit At4g37870

 
Sequence (A. th genome BLAST matches underlined)
>16-K025980-022-864-H02-8409
ATGAAGCCTTTACAATTGAATATATCCTGCCCGTAATAGCGTCGACCTAATCACATATTA
TGCGTACCGACCTTTTTTCAATGAAAATGAGCGGACACTAAAACACAATAATCTTCCTTA
ATTCGATATAAAGTATGTTATAAACAAAAGTAACGTATGAATAATCTGTATATGTGAAGT
TATTATAAGGACCTGATAGATTGAAGCTGAATCTTCTGACGCTCCTCCTCGGAGACGGCG
GCAAAAGCAGCGGCGGCGTTTTGGTTGATCGGTGTGGTAGGAGCAGAACGTTTCTTCTGT
AACGAATGAACCTCATCGATGGTTGTGGCATTCACCGTCGGACCACTATCGTCGTGGCAG
ACTCCGCTACCTCTCTTTGCTGCTCCGGTCGTTATCTTCGGCATCACCGGTCCTTTAGGG
AAACTAGACCCTCCGTCACCGTTAGTAGCATTTCCGTTACCGGCCGACATCTTTTTCCTG
TAACCACAACACAAAAAAAAGACAGAGTTACGAAATTGATTA
GenBank Accession CR403637 [GenBank]
Graphic View Graphic view of gene At4g37870
Predicted Position of Insertion Chr4:17805902 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T28I19
Hit Gene Code At4g37870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphoenolpyruvate carboxykinase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR403637 [GenBank]


Last Updated on 10.06.2021 13:37