SimpleSearch - Line and FST details


Line specific information

 
Line ID 866E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N483093)
Segregation Analysis 50:13:4
Confirmed for Hit At5g46200
Parent of DUPLO pair 11917
Parent of pair(s) none

Gene hit At5g46200

 
Sequence (A. th genome BLAST matches underlined) 
>37-K026078-022-866-E05-8409
CTCATGATCCCTTCTGCATTGTTGTCTCAAAAAAATAAGATTCCTCACCACCAGCCAAAA
TTATTTACAGAGACACATCTACCTGTAAGTATGGGATCCTCCCTATAGTGAGACCAATTA
ATCCCCCCATTAGGGGGACTCACTTTCCAAGCTCCCAAAAATTTCCGAGGAGGGGGGGGT
GTAAATAGCTATCTTTGTGTTCGTAATTACAAGTTCAAATATTTAGTTTTAGATATTGAA
AACATTGATCTTTTTATCAAACATCGTTACAAATTATAAAAATAAAAGTAATTACAAAGT
ATATGTTTATTGAAGACGTATGGGATCCCCCCTATAGG
GenBank Accession CR403838 [GenBank]
Graphic View Graphic view of gene At5g46200
Predicted Position of Insertion Chr5:18729358 - go to primer design
BLAST e Value 2e-57
Hit Clone Code (BAC ID) MCL19
Hit Gene Code At5g46200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation carboxyl-terminal proteinase-like protein (DUF239)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR403838 [GenBank]


Last Updated on 10.06.2021 13:37