SimpleSearch - Line and FST details


Line specific information

 
Line ID 869A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N483336)
Segregation Analysis 50:45:39
Confirmed for Hit At2g45890
Parent of DUPLO pair none
Parent of pair(s) 3126, 3316, 24166, 75307, 75310

Gene hit At2g45890

 
Sequence (A. th genome BLAST matches underlined) 
>57-K026114-022-869-A08-8409
CCGGAATGAGCCTTTACAATTGAATATATCCTGGAGACATCTTCCACACTAACGCTGTTG
TCTTGAGTGGCCATGAAGAAGATGTCTCCGAAGACGCCGAGGAACCAAAAGATGATGTCG
TCAACGACGTCCACGGAGATGGAGACGAAGAAGACAGCGACATTGATTCTGCAGAAGATG
CAGGTAAAGTGTTTAAGATTGTAACTTTCTTCTTTTGTCATTTCGTTAAATCGGGGTTTC
TAGTGCAGAGCTAGAGATGATGAGGGAAAGATTTGCGAAGCTGTTGCTTGGTGAAGACAT
GTCAGGAAGTGGGAAAGGAGTTTGTATGGGATCCTCCCTATAGTGAGACATCTTTA
GenBank Accession CR404172 [GenBank]
Graphic View Graphic view of gene At2g45890
Predicted Position of Insertion Chr2:18883679 - go to primer design
BLAST e Value 9e-158
Hit Clone Code (BAC ID) F4I18
Hit Gene Code At2g45890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RHO guanyl-nucleotide exchange factor 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g39550

 
Sequence (A. th genome BLAST matches underlined) 
>57-K026082-022-869-A08-8409
CGGACAGNAGCCATTTACATTGAATATATCCTGGAGACTTCTTCCCTCTAACGCTGTTGT
CTTGAGTGGCCATGAAGAAGATGTCTCCGAACACTCCCGAGGAACACAAACATGTCTGTC
GGCTCCGCCGTCCTCGGATATGCTCACGAGAAGGACAGCGACATTGCTTCTGCCGAATAT
GTGCGCGGCGTGGTCAGCATTGTGCCTTTCTTGTTTTCCCCTTTGCCTACACTCTTGCCT
GTCCTCCCAAGATTCTCCATGCCGAAACACCTTGCTTTCTAGTGTCATCATTCTCAGCTG
GTATGGGACCAAAGTGATCACGAGGTATTGTCACAAAAAACTTACCGCTAGCAGCATTAG
CTTTCCCAGTTTTTACTGCCCGCTCGGTAGTAAATGCTTTCTCAGGACGGTCTTGGTTGC
GGATAATATGATGAACCTTGGCTGCAGTTGCCTCANCAGAACATTTGGTAACATTTGCTA
ANCGAATAGCAGAAACTAGAGCTANGTTGA
GenBank Accession CR404171 [GenBank]
Graphic View Graphic view of gene At5g39550
Predicted Position of Insertion Chr5:15838915 - go to primer design
BLAST e Value 1e-141
Hit Clone Code (BAC ID) MIJ24
Hit Gene Code At5g39550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Zinc finger (C3HC4-type RING finger) family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37