SimpleSearch - Line and FST details


Line specific information

 
Line ID 871A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N483525)
Segregation Analysis 50:24:20
Confirmed for Hit At5g45810
Parent of DUPLO pair none
Parent of pair(s) 89892, 89914, 89953, 89992, 90008, 90025, 90072, 90083, 90107, 90117, 90127, 90136, 90144, 90156, 90161, 90162, 90164

Gene hit At5g45810

 
Sequence (A. th genome BLAST matches underlined) 
>33-K026083-022-871-A05-8409
ATTGAATATAATTGGACAGAAACTAAATCATAATAAAATATCTATTATGATTTTTTTTTT
AAAAACTTTCGAAGAAACTCCCCACGTGGAGATGGCTTAAGCTTCAAAGGATTGATAAGC
AAATTCAAACCCGGCATCACATATGTTACTATTGACAATAAAACATTGTTGCACTTGAAT
TGCGAATGGGATCCTCCCTATAGAGAGACTTTAGCGAAGGTTCCGTGGCCAAGAAGCCTA
CCCATTTCGTATTTGCCAAGGATCAGAGCTTGATGATTGCTCTGATCCTGCTTCTTCTTT
ATCGATTTCACTTTTCTTAACAAATCCGCCATTGAAAGCGAGAGATTCTCATGAAATGGT
GAAGAAAAGTTTGGATTTTGAGATCAAGATCTTCTTGATCGAAGATCGAATTC
GenBank Accession CR404413 [GenBank]
Graphic View Graphic view of gene At5g45810
Predicted Position of Insertion Chr5:18585249 - go to primer design
BLAST e Value 3e-114
Hit Clone Code (BAC ID) MRA19
Hit Gene Code At5g45810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CBL-interacting protein kinase 19
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g33870

 
Sequence (A. th genome BLAST matches underlined) 
>33-K026117-022-871-A05-8409
CGAATAAGCCATTTACAATTGAATATAATTGGACAGAAACTAAATCATAATAAAATATTA
TTATATTTTTTTTTTAAAAACTTTCAAAGTATCCCCCCAATGGAGATGGCTTAAGCTTCA
AAGTATTGATAATCAAATTCAAACCCGGCATCACATATGTTACTATTGACAATAAAACAT
TGTTGCACTTGAATTGGGTATGGGATCCCCCCTATAGTGAGACTTATTAGAAANCCCCTT
GAACGATAATACTTTCCAATAACCCTCCAAAAATGACCAAATAATTACCAATCNTAAATA
NNATTTTCTTAATTACCAAAATCAATACTTCCTAAATATACAACCCAACCAATCAACAAA
TCAATTCACAACTCTCACAAAAACATAAACAAACTATCACTAAACACTACAACATCTCAC
CAATATAATCCTACACAAACACCAATCTTTTTTTTTT
GenBank Accession CR404414 [GenBank]
Graphic View Graphic view of gene At1g33870
Predicted Position of Insertion Chr1:12303124 - go to primer design
BLAST e Value 3e-68
Hit Clone Code (BAC ID) T3M13
Hit Gene Code At1g33870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37