SimpleSearch - Line and FST details


Line specific information

 
Line ID 872F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N483687)
Segregation Analysis 50:15:8
Confirmed for Hit At1g79620
Parent of DUPLO pair none
Parent of pair(s) 3771, 3790

Gene hit At1g79620

 
Sequence (A. th genome BLAST matches underlined) 
>86-K026084-022-872-F11-8409
GAAGCCATTTACATTGAATATATCCTGACGAACTACGTCCTATTAGTACCAAGTGGAATT
GACTTAGCACGTGGACCAGTATCATCTCAGACCTGAAAAGTTTTGAGTGCAATGGTCCCA
CAGAGCTGATTCTTGTTCAACCTGACTGCAGTTTTTATACCATTTGCATCAGAGAACCCG
TAGGGAATCCTCCCTACATCCAGCCGATGGCGTTGCGAGAGAAGCAGTCGATCCGTGAGA
TCAGCCGACGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATTTGAACGCAAGTATGG
GATCCTCCCTATAGTGAGACNTATTANTCNNNNNNN
GenBank Accession FR816917 [GenBank]
Graphic View Graphic view of gene At1g79620
Predicted Position of Insertion Chr1:29960879 - go to primer design
BLAST e Value 3e-25
Hit Clone Code (BAC ID) F20B17
Hit Gene Code At1g79620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR404718 [GenBank] FR816917 [GenBank]


Last Updated on 10.06.2021 13:37