SimpleSearch - Line and FST details


Line specific information

 
Line ID 878D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N484238)
Segregation Analysis 50:43:31
Confirmed for Hit At1g16670
Parent of DUPLO pair none
Parent of pair(s) 6778

Gene hit At1g16670

 
Sequence (A. th genome BLAST matches underlined) 
>76-K114414-0022-878-D10-8409
CGTTTTATCCCAATGTACTTTCAATTTAGAATAACGCTGCGGACATCGACGTTATTGAAT
TGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCT
GATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGGATCTGAT
CCCCGGGGATCCGATTTGGTGTATCGAGATTGGTTATGAAATTCAGATGCTCACCTGCCC
AGCCGCTAAAAATCTNTCCCCCNNGATCTCTGATTTTGGACTTGCTAACCTGCCCGGCCG
C
GenBank Accession HE665022 [GenBank]
Graphic View Graphic view of gene At1g16670
Predicted Position of Insertion Chr1:5698363 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) F19K19
Hit Gene Code At1g16670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g54700

 
Sequence (A. th genome BLAST matches underlined) 
>76-K026470-022-878-D10-8409
GNAGCCATTTACATTGAATATATCCTGACCCACCTTGCGTCTTGTGCCACCATGAGGCCT
GAGCGATTTGCGAGTGTTTATGGTCTCAGATGGGCTGCATCTTCTCGTTTGACCAGGGAT
GTGCGTCTGTCAGACCAGCGAATGATCAGCGACGACGTAACCGACTCATCCACCTGATTG
TTTTCTCCGAAATGCAATCGCTTCTTTCACAACGTAGGCAAGCTTAGCCTTCAGATGAAC
GGAAGCACCAAGCAGTAGCTCAACGGGATCTTGCAAAAACTTGAGCAATTGTATCGCATC
AGTACCTCAATAAGAACACGATGTTCATCGATCTCTGGCGCAATACAGGCTCCTCGATGC
AGAAGATAATTTGTTCTGAGGTAAAAACGTATGGGATCCTCCCTATAGTGAGGTTGACTA
TTAAATANAGTAGTTTCCTATTATTCATTTTCTATGATACCTGATCAATGTTTTGATAGA
CGACAATATGTATGTGGAAGCTAAAACTCAAA
GenBank Accession CR405420 [GenBank]
Graphic View Graphic view of gene At3g54700
Predicted Position of Insertion Chr3:20251039 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) T5N23
Hit Gene Code At3g54700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphate transporter 1;7
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37