SimpleSearch - Line and FST details


Line specific information

 
Line ID 889B02
Vector Used pAC161
Line Availability available as T3 set from NASC (N485262)
Segregation Analysis 50:28:24
Confirmed for Hit At2g35270
Parent of DUPLO pair none
Parent of pair(s) 8967

Gene hit At1g16710

 
Sequence (A. th genome BLAST matches underlined) 
>10-K114076-0022-889-B02-8409
TTTATGTGGCTTTTGTTCTTACAAAATCTTTACCAATATCCCTATTTAGCCTATAGCATT
CGCTCAAAATCCCCACATGACAGAATTCTGACTTCTCTGATTTCTGAAACATTTTGTCGA
TATTTCGATTTCCGACACCTCTATTCTGCCCGGCCACTAAATTGGTAATTACTCTTTCTT
TTTCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATAAGGT
AAGTGTTATTTAATGTGTCTTTTGTTACTTACAAAATCAAAACCAAAAATCCCTAAATAG
CCAAAAAAAATAAATCAAAATCCCCAAATCGAAGAATTCAGACTTCTCTGATTTCGAAAT
AATTTGTCGATATTTCAATTTCCTCGTCGTCTAACCTGCCCGGCCG
GenBank Accession HE665253 [GenBank]
Graphic View Graphic view of gene At1g16710
Predicted Position of Insertion Chr1:5713754 - go to primer design
BLAST e Value 3e-27
Hit Clone Code (BAC ID) F19K19
Hit Gene Code At1g16710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation histone acetyltransferase of the CBP family 12
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At2g35270

 
Sequence (A. th genome BLAST matches underlined) 
>10-K114077-0022-889-B02-8409
CTTGCAAATTGGCGGCGGCGGATGTGGAGGGTATATGTACGCGGAAGCCACTGGCGGCGG
CGGAGGGTTGTCTTTCTTTAATTTGCCGAGGTAGTATGCCTCTGATTGGACTTGACAGTT
GTCTGGGGAATCTCACCTGCGCCAGTATGGCACCGTTTCATCTCTTTAACTAAACTTTGA
CTGTTTTTTCCACTTTTTGGTTTTTCTCCAAATTTTATGAAATTATGATTTAAGAAAAAA
AACGATGTTGTTCATGTATTGACCCTCTGACTGCATGGTTTCTTCTATTGGGTTAATTGA
CTAACCTGCCCGGCCGCTAGACTAAATTTTATTCAACTATTTCAAAAATACTAACCTGCC
CGGCCGCTAGNNGNGGGNNNCNCNCCGGCGCCGGTGGGGCTCCGTTT
GenBank Accession HE665254 [GenBank]
Graphic View Graphic view of gene At2g35270
Predicted Position of Insertion Chr2:14857718 - go to primer design
BLAST e Value 3e-36
Hit Clone Code (BAC ID) T4C15
Hit Gene Code At2g35270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative AT-hook DNA-binding family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37