SimpleSearch - Line and FST details


Line specific information

 
Line ID 891H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N485533)
Segregation Analysis 50:31:28
Confirmed for Hit At5g13580
Parent of DUPLO pair none
Parent of pair(s) 83000, 83006, 83011, 83015, 83018, 83020, 83021

Gene hit At5g13580

 
Sequence (A. th genome BLAST matches underlined) 
>72-K114617-0022-891-H09-8409
ACGCCTGATAATAAGGTGACTAATGAACTTCCTGCCCAGAAAGAGGCTAATATTACTAAC
GTGCCCGGCCTCTACGTTTTATCAAAATGTACTTTCATTTTATAATAACGCTGCGGACAT
CTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCA
TCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATAT
ATCCTGCCCAACGCCTGATAAGAAGGTGACGAATGAGCTTCCTGCCCAGAAAGAGGCTAA
GATTACTAACCTGCCCGGCCGCTAGAANANNNTNNNNNNNATNGNCNCTANNNTCNNAGG
TGGNNAANCNNNACNGGANTATNAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTG
CGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGA
AGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCATTTCGGTGTAGGTCGTTCGC
TCCAAGCTGGGCTGTGTGCACGAACCCCTCGTTTTGCCCGACCGCTGCGCCTTTATCCGG
TAACTATCGTCTTGAGTCCACCCGGTAAATAAATATTATTTGCCACTGTATGCATCCACT
GTTAACTTGATTATCAAAGCAAGTTATGTATGTTGTGCTACATACTTCTTGAGTTGTTGG
CCGTACTCTGGCTTCATTAATCTGCCATGTCGTTAAAGTTATTTTNTACTATGAGTGTTC
TTATATTTTTTTGTATTCTTGCTATTGNATTTGTGATTACTTTTATTAGTTTGCATTGTA
AAATTGTATTTTTTGTATTATGTATTGGTTATGTTTAGTTAGCTTATTATGGTGTGTTTT
CTATTGATTGNGTTAAGTTTGTATAGTTTTTGAGATGTTTGTATGTAGGGCATNCTTCTT
ANTTTATTAATTCTTCTATTATCTATTTTTTTATCTCCTTCTTATATCATATTATATTCC
TTCCCTACTTTTCCCTTCTACATTTATATTTCTCCTTTATA
GenBank Accession HE665428 [GenBank]
Graphic View Graphic view of gene At5g13580
Predicted Position of Insertion Chr5:4372853 - go to primer design
BLAST e Value 2e-25
Hit Clone Code (BAC ID) T6I14
Hit Gene Code At5g13580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC-2 type transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HE665428 [GenBank]


Last Updated on 10.06.2021 13:37