SimpleSearch - Line and FST details


Line specific information

 
Line ID 894C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N485759)
Segregation Analysis 50:49:48
Confirmed for Hit At1g27820
Parent of DUPLO pair none
Parent of pair(s) 69647, 97631

Gene hit At1g27820

 
Sequence (A. th genome BLAST matches underlined) 
>51-K112794-0022-894-C07-8409
CATCTCCAAACTTCACCGCTACTAATTTGCTTCATCTCGAACGAAACTACGAAAGAAAAA
GACGTTTGTTTTTCTGAAAGAGAAAAGCGAGAAGCCACCTGAATTTATTTTCGTTTGGTT
ATTAGGATTGTTGTTGGAGGAGATTAGATTATGTAGAGTAACACAGACTTCAGTTTCCTT
TTTTTTTTAAGGCTGATCCAAGAATTTCCTTTTGGTTTCACCCAATTCTGGTTGACCTCC
AAAATTGCCCTTTTTCCCTACAACGCCGATAAAAAATAGCTTCATCTCTAAGGGGGGTAT
TGGTTTTCCCAACGTTTGTTTTTCTTTTTAAAAAAAGCGAGAAACCGCCCGAGTTTATAA
TCGTTTGGTTATTAGGATTGTTGTTAGAGGAGATTAGATTATGTAGAGTAACACAGACTT
CAGTTTCCTTTTTTTTTTAAGGCGCAACACAAAATTTCCTTTTGGTTCCCCCAAATTCTG
GTTAAACACAAAAATTTCCTTTTTTCTCTTAAAAGCCAAAAAAAAAAAAAAACCCCCTTT
CGGGGGGGGGGGGTTTTTCCAAAAAATTTTTTTTTTTTTTTTTTNGGCCACCACCCCCCC
C
GenBank Accession FR817363 [GenBank]
Graphic View Graphic view of gene At1g27820
Predicted Position of Insertion Chr1:9691666 - go to primer design
BLAST e Value 2e-91
Hit Clone Code (BAC ID) T22C5
Hit Gene Code At1g27820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37