SimpleSearch - Line and FST details


Line specific information

 
Line ID 895G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N485902)
Segregation Analysis 50:50:23
Confirmed for Hit At1g48240
Parent of DUPLO pair none
Parent of pair(s) 1146, 3068

Gene hit At1g48240

 
Sequence (A. th genome BLAST matches underlined) 
>47-K030277-022-895-G06-8409
NNNNTTTCGCACTATCCGGACATGAGCCATTTACAATTGAAAAAAACTGATATCTTGGAG
AAAGTGAATACCTTTTACAGTCTCTCATCTTCTCAGCAAGTTCTTCGAGTTGCTTGCTTT
GTCTACTAGAATCCTTGATCTTATCCAACCTCTGGAAGCCATTCCTGCATATCAATGTTG
AATCTCACTTTTAAAGAAAAAAATCATAAGACTTGTGCCTCAGATTCACTATCCCAACTC
TTATTTTCTCGTCTGTGAAACTCAAATTCAATCTCCTAACAAATCTAGTTCCCAAAAAAT
CTATAGTCTTGTCGATAACGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACTTCC
CTTTAAAAAGAACGCTAACGAAATCTCTTTTTACAACAACACCTTAGAAAAAAATTGAGG
AAA
GenBank Accession CR935674 [GenBank]
Graphic View Graphic view of gene At1g48240
Predicted Position of Insertion Chr1:17811261 - go to primer design
BLAST e Value 3e-142
Hit Clone Code (BAC ID) F11A17
Hit Gene Code At1g48240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative plant snare 12
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR935673 [GenBank]


Last Updated on 10.06.2021 13:37