SimpleSearch - Line and FST details
Line specific information
| Line ID | 897B12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N486040) |
| Segregation Analysis | 50:49:40 |
| Confirmed for Hit | At1g66960 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5607, 5652, 10408, 57354, 91756, 91764, 91765, 91766, 91767, 91768, 91769, 91770, 91771, 91772, 91776, 91786, 91789, 91797, 91803, 91804, 91805, 91806, 91807, 91808, 91809 |
Gene hit At1g66960
| Sequence (A. th genome BLAST matches underlined) | >90-K113889-0022-897-B12-8409 GTACCGATCGAAGATTGTCCTGCTATGCCGCTATACTTTCATTTTATAATAACGCTGCGG ACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTG ACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGA ATATTGGAGATCACTACCCTGCCCGGCCGCTACACTGAATTACATATGCTTGCGTATACT TGGAGTAGGTCCCGATGGAGGACTAACCTGCCCGGCCG |
| GenBank Accession | HE665454 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:24988627 - go to primer design |
| BLAST e Value | 4e-20 |
| Hit Clone Code (BAC ID) | F1O19 |
| Hit Gene Code | At1g66960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Terpenoid cyclases family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g51620
| Sequence (A. th genome BLAST matches underlined) | >90-K113888-0022-897-B12-8409 TGCTTTCTCCAGGAAATACTACTGATCGTCATTTGTCCGGTTTGGCTACTATACTTGCCT TTTATAAAAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCT TTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACAT GAAGCCATTTACAATTGCATCACGAATTTATCAATACTCTTTCGTTCTTAGTATATGTAG ATTTTCGTAGTCTTTAAAAATTTACCAATCAGGAGAGTCATCTAACCTGCCCGGCCGCTA CNTATATGGAGAGAGTTCTTCGCGTGCTGTGGAGAAATTTGTCTCTAGGCTAGGTGTATT TACAAGCAAATGTCGATAACATCCTAAGGCTGCCATGATACCATACGTGTCTGCGTAGAG ATAAAAGATTGAGGTTGCCTGACGTTTCATCCAAGCAGTTGGCATATTTTGTTTTCTGTG CTAATCGATTCAAACGAAGTCGACGCCCTGGGGTGGCCATTGTTACTCGTTAGATTTTGT TGTCTAGACTCTATATCGGATGATGCGCTTGTTGTGCTCGGGTTTCCTGTAAGTGTAACA GAACTTTAAGAATTCTTTGGGATTGTGTTTGGGCTAACGCTGCAGTATTAGCTTATGTTT GTGTGATGAGTTATATTTTTTATA |
| GenBank Accession | HE665453 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:19146514 - go to primer design |
| BLAST e Value | 6e-07 |
| Hit Clone Code (BAC ID) | F26O13 |
| Hit Gene Code | At3g51620 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | PAP/OAS1 substrate-binding domain superfamily |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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