SimpleSearch - Line and FST details


Line specific information

 
Line ID 900D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N486342)
Segregation Analysis 50:45:25
Confirmed for Hit At1g69828
Parent of DUPLO pair none
Parent of pair(s) 85268, 85269

Gene hit At1g69830

 
Sequence (A. th genome BLAST matches underlined) 
>12-K112402-0022-900-D02-8409
TGAAATGTTTATTTAGAGTGGAATTAAAACCCCCCCTTAAGTTGTCCCACTTTTTTCAAT
GCGGAGAGAATTTCTATTGTTGTATTGGATGCTTGTAAGTGTATGCATACTATATGAAAA
TAATATATCTATTTCCAAAATCCAAGCTTCTGTTTTTGACTCATACATAATGAAAAACTG
TTTGTTTTGGGGCTTTCCCACATTCTCCGAAATTCTTGTTCTCCGATCAAGATCTTTTCT
GAGAACACTCAGATTTAATGTATGAGTGGAACAAAAAACTATTTAATCTCCCGCGTAAAA
CACTTTAGATATTTGCCTTTGGGAGAAAAAGTGTATATTATTTTCAAATCCCCTGTATTA
ATAACGCATGTCCGGGAGATCTTTTGGATCCCAAGAGTATGATTGTCTTAGTAGAAAAGA
AAGAGAATTACCCCTTTTTTTTCTTTCAAAAAAGTATATGTCCCCCCCGTTTTTTTTACA
AAAAGTTATTTTGTTAAAAAACAAAATCCATCCCCCCCTTTTGGCGAAGAGAAAAAAACA
AACAAACTCTTTATTAAATTTCTTTTTACACTCTCCTCCTCGTCTCCTGTGGCGGGGGAT
AAAAACTCCAATCTTGTTAAAAAAAAAAACCCGCAAAAAAAAAAACNNGGGCTGTCCTAT
TTTGACTATCAATCACTACTAATCAACCCCCCCACCCAAATTTTATCCTAGCCCCCCTTT
TACCTCTCACCCATTCTCCCTAACATATTCCCATAATCCTTCCGCTCACTCTCATTGACT
CTAGCCTCCACACTACCCCCTCACTCCATATTTCCACATTCTCTCTTTCCGACAACCTCA
CTTTTTTTCCTATTAATATTCCACTATACAGCACCCACTCACCCACTAATGTATCCCTCC
CCCAACTAACCCCCCCTCTATTCTAATCTCTTCCACACCCGCCACTAACTCCTATACTCT
TCTAGATAACTTGCCAATCGCCCCCGCACCTACTCCATTCTCACTTGCACTCATACCCAT
CTCCCCCTCTCCTTCCCACCGCAAATGATCTATCTACTTATATATTCCCCCTAACCTCTG
TACCCTCCGCTATAAATACCCCCATTACCTACCTTCTGTACCACACTCTCGCTTGTAACA
ATCTTTAACTACTTCCTCCACTATCCTTTCCAGCCGATACTACTCCCTAATCATTATCCC
TACTTTTTTTCTCCTTCATTACCCTTCCTCTCTTCCTTTCTCATAA
GenBank Accession FR817570 [GenBank]
Graphic View Graphic view of gene At1g69830
Predicted Position of Insertion Chr1:26288402 - go to primer design
BLAST e Value 7e-25
Hit Clone Code (BAC ID) T17F3
Hit Gene Code At1g69830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha-amylase-like 3
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Other FSTs Supporting this Hit FR817568 [GenBank] FR817571 [GenBank] FR817570 [GenBank]


Last Updated on 10.06.2021 13:37