SimpleSearch - Line and FST details


Line specific information

 
Line ID 901F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N486471)
Segregation Analysis 50:49:42
Confirmed for Hit At5g36680
Parent of DUPLO pair none
Parent of pair(s) 12204

Gene hit At5g36680

 
Sequence (A. th genome BLAST matches underlined) 
>86-K029994-022-901-F11-8409
TGGGATCCTCCCTATAGTGAGACTTAGTACGCCCGTATGTTGGTTTTATGGCATTTAATA
CTATCTTACTTGAATATTATTCCCTAAAGATGTTTTATCATTAGATGATATTATGAACCA
GCTCAAATACCCCTGAAACAAATTGTTTACTACACAATTACATCTAATACGCATTGACCC
GCTGCAGGGTTTCTGACCTCGGGCTCGATGTGTTACTAATGAAATTACTAAAGTATGGGA
TCCTCCCTATAGTGAGTCGTATTACTCGATTTTTATTAACATCACCTGTACTGGTATGTG
TATGCCCCCAGTTTTTTGTTTCCTTGTCCTTTTACATGAATTAACAGTTGCAAAAATAAT
TACAAAGTATTCGTCTAATAGTATTGGCGGGGGGAATTCATTGTTTTCAATTGTTGATTC
CAAATTATGCTCTTAGTCGATGCTCAATCTTCGTGTGTAGAAGAAAA
GenBank Accession CR935878 [GenBank]
Graphic View Graphic view of gene At5g36680
Predicted Position of Insertion Chr5:14406868 - go to primer design
BLAST e Value 2e-57
Hit Clone Code (BAC ID) F24C7
Hit Gene Code At5g36680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pol-like polyprotein/retrotransposon, putative (DUF239)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37