SimpleSearch - Line and FST details


Line specific information

 
Line ID 905B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N486807)
Segregation Analysis 50:50:27
Confirmed for Hit At3g22850
Parent of DUPLO pair none
Parent of pair(s) 8042, 8160, 97104

Gene hit At3g22850

 
Sequence (A. th genome BLAST matches underlined) 
>82-K030264-022-905-B11-8409
CCATTTACATTGAATCTCTCAGATTCAGTGAAACATATCCTAAACTATCTTTGCAAGCCA
GTGAAACATTAAGATAGCAAATCTCTCATATCTAGGACAGAAGAAGAAAACATCATCCTG
AGGAATAAACTATTGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACTCTCC
GenBank Accession CR936085 [GenBank]
Graphic View Graphic view of gene At3g22850
Predicted Position of Insertion Chr3:8089397 - go to primer design
BLAST e Value 4e-65
Hit Clone Code (BAC ID) F5N5
Hit Gene Code At3g22850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation aluminum induced protein with YGL and LRDR motifs
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR936086 [GenBank]

Gene hit At2g24030

 
Sequence (A. th genome BLAST matches underlined) 
>82-K114033-0022-905-B11-8409
TCTACTAGTTTCTTAACAGAGAGGTCCCTTACTTGACCGGCCGCTAGCGGACATCTACAT
TTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATAC
TCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGTAATCATGGCT
TCATTGAGAAAACGAGAGCTTATATCTGAGGTTTTACAATAGATGGCTATCGAGAGAGAA
ATGGCTATACAACAATTTTCAGATTCGGATATGTCCCTAACTTGCCCGGCCACTATTATT
TGAAAAGCTTTAAAATACCTGTTTAACAATTAGACTACCCTGCCCGGCC
GenBank Accession HE665714 [GenBank]
Graphic View Graphic view of gene At2g24030
Predicted Position of Insertion Chr2:10221832 - go to primer design
BLAST e Value 7e-22
Hit Clone Code (BAC ID) T29E15
Hit Gene Code At2g24030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc ion binding / nucleic acid binding protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37