SimpleSearch - Line and FST details


Line specific information

 
Line ID 913F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N487613)
Segregation Analysis 50:35:34
Confirmed for Hit At2g35890
Parent of DUPLO pair none
Parent of pair(s) 10315, 82039

Gene hit At2g35890

 
Sequence (A. th genome BLAST matches underlined) 
>06-K030979-022-913-F01-8409
ACACCCCCACGAATTCCTAGAGGCCATTGTAAGACTGAGACCAATACCAGAAGAGGAAGC
CAATGATCGTTTAGAATCCTCCACAAAAGTGTAATGAAGTTGGCGTGAAAGATATTGTTG
TTGTCTGAANAANTGTAATGANTATGGGATCCTCCCTATAGTGAGACCTATTACTC
GenBank Accession CT027047 [GenBank]
Graphic View Graphic view of gene At2g35890
Predicted Position of Insertion Chr2:15067337 - go to primer design
BLAST e Value 4e-49
Hit Clone Code (BAC ID) F11F19
Hit Gene Code At2g35890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation calcium-dependent protein kinase 25
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g63210

 
Sequence (A. th genome BLAST matches underlined) 
>06-K030978-022-913-F01-8409
CCTATCTTTAGTGTGATTTCTTTCTTCTGATTGTTTCTTCTACTGTTTGAGGATGTTTTT
GTTCGTTTAGTTCTTCTTCTATTGTGTAATGAAGTTGGCGTGATAGATATTGTTGTTGTC
TTAATATTTGTTCTGTCTACTTCAACTCTTTTTCTCAGTATCATGTCTCTGTTCTTCTTC
TTCTTCTCCNTCGTCAGAACCTTTCGCTAAAAGCCCATCGTCAAACTCGTGCTGATCATC
TTCGTCTTCGTCATCTTCCTCACGGTTCTCCACTGGATCTTCGTGGATCTGGGGCTCTGT
CTCAAGAACGGAGT
GenBank Accession CT027046 [GenBank]
Graphic View Graphic view of gene At1g63210
Predicted Position of Insertion Chr1:23443709 - go to primer design
BLAST e Value 2e-38
Hit Clone Code (BAC ID) F16M19
Hit Gene Code At1g63210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transcription elongation factor Spt6
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37