SimpleSearch - Line and FST details


Line specific information

 
Line ID 915D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N487791)
Segregation Analysis 50:28:18
Confirmed for Hit At1g66840
Parent of DUPLO pair 12268
Parent of pair(s) none

Gene hit At2g36530

 
Sequence (A. th genome BLAST matches underlined) 
>84-K031461-022-915-D11-8409
CCTGTAAACTAACATGCTATTACATGGTTTATGGCTTAACCATCTTGTTCTCATATGTTT
TTCCAGTCTGTGATTAAGAAGAAGTATGGGATCCTCCCTATAGTGAGACNAACGNGTCTT
CGGCTCANNAAAGGTTCGATTCCGAATTCTTCTTTGTTCAACTTAATTTTGATGATCAAA
GTATGGGATCCTCCCTATAGTGAG
GenBank Accession CT027155 [GenBank]
Graphic View Graphic view of gene At2g36530
Predicted Position of Insertion Chr2:15322352 - go to primer design
BLAST e Value 2e-29
Hit Clone Code (BAC ID) F1O11
Hit Gene Code At2g36530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Enolase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g66840

 
Sequence (A. th genome BLAST matches underlined) 
>84-K114403-0022-915-D11-8409
CGGACATCCACATTTCTGCTTTGAAACAAAGTTGGTTTTTACTCTCTCGTTTTCGCGAGT
GTGACTTTCTTTCTTGCTTGCGTGTTAAGTTTCACATTGTTTTTAGCTTGTAAGTGATTT
ATTTGTTTTGTATTTTTGTTATTTTTTGATAATAAAAAAATGATGTATTTATGTAGACTT
TAGGTGTATATTAATGAAAATAATGTATTGCATTGTATAAGAGTCAGGTAAATTTTTTCA
TATTTGATTTTGGTAATTTGAATGGTTTATATCGAACTAACCTGCCCGGCCGCTAAANNG
NNNTGNNTGTTGNTTTTTTTTTGCTTGCNNTGGTTGTTTCTCGTCGTTTTTGTCTTGTGG
GTGGTTGTTTTGTTTTGTGGTTTTGTTGTTTTTTGGTGCGGNNNGNTTGTTGGGGTTTTG
TGGGNGCTTTGTGTGGTTTTTTGNNGGTNTTGTTGTGCTGTGTTTCGNCGTCCCCTCGGG
TTGTTTCGTCTCNTTTGTTTTTGCGNGTTTGGGGGGTTTTTTTCGNCCCTCCCCGGCCGC
GCCTTTTACNCGNNNNGNGGGTTGGGTNNNTTGNNTTNGGNNTGTCTTTTGTNCGNTTGC
TGTTGTTGTGTGCTGTTTTTTTCTGNTGTNGTTTTTCTTTTGGCTNCCCTCGTGTTCTTG
CTGCTCCTTTTGCCGTTCGTNTTCCTCCTTGTTGTCTNTCCTGCTTGCGCTTGTGGCGGT
GGCCNGTCCNGCTCTGTCTGCTCGTCTGCTCGCGGTCNTGTTTTGCGCNCTGGTTGGCTC
TTTCCTTGTTCGGCNGCCTTTGTTNGCGTNGNNGGCCTTCTCTTGGCCGGCCCTGCTCTT
TNTTCCCGCTCCTCTGCGTCNCCGGTGTCTTTCTTTGTTCTTCTG
GenBank Accession HE665873 [GenBank]
Graphic View Graphic view of gene At1g66840
Predicted Position of Insertion Chr1:24934141 - go to primer design
BLAST e Value 1e-60
Hit Clone Code (BAC ID) F4N21
Hit Gene Code At1g66840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PLASTID MOVEMENT IMPAIRED protein (DUF827)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37