SimpleSearch - Line and FST details


Line specific information

 
Line ID 915E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N487799)
Segregation Analysis 50:46:34
Confirmed for Hit At1g05250
Parent of DUPLO pair 12399
Parent of pair(s) none

Gene hit At2g36530

 
Sequence (A. th genome BLAST matches underlined) 
>53-K031461-022-915-E07-8409
GTCCCTCTTGTTCTCATAAGCTTTTCCAGTCTGTGATTAAGAATAAGTATGGGATCCTCC
CTATAGTGAGGCAGGAAACTCATCAATCTTAGAGTATGGGATCCTCCCAATAGTGAGGNN
NGNANNTGGTANANTATGGANAAAACGATGATGATNATGATATT
GenBank Accession CT027161 [GenBank]
Graphic View Graphic view of gene At2g36530
Predicted Position of Insertion Chr2:15322353 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) F1O11
Hit Gene Code At2g36530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Enolase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g05250

 
Sequence (A. th genome BLAST matches underlined) 
>53-K114403-0022-915-E07-8409
GTTTTTGTTTGGCCCTCTCTTTGTTCCTTATAATATGTGTGTTTTATTTTTGTTATTGAT
GAATGTTAATGCCGAAGTAAAACATACTAAAGTTAAGGCCATCAATAACAAAAATATTAA
TTCATAGTTAAAACGGTTAAAGAAGAGAAAATCACAGTCGAATCGGATTCGGATCTTCTC
TGGACTATATCCATCAAGAAAACAGAACTTTCATACAAGACCTTACACCTTAGGCCCGGT
AACAAAACACACTTATTATACGCTACTATGATGTTCCTGATGCAACGAACTAACCTGCCC
GGCCGCT
GenBank Accession HE665877 [GenBank]
Graphic View Graphic view of gene At1g05250
Predicted Position of Insertion Chr1:1525610 - go to primer design
BLAST e Value 9e-142
Hit Clone Code (BAC ID) YUP8H12
Hit Gene Code At1g05250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37