SimpleSearch - Line and FST details
Line specific information
| Line ID | 915G03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N487819) |
| Segregation Analysis | 50:46:41 |
| Confirmed for Hit | At2g22980 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 80175, 80192, 80205, 80218, 80233, 80234, 80235, 80236, 80237, 80238, 80239, 80240, 80241, 80242, 80243, 80244, 80245, 80246 |
Gene hit F12A12
| Sequence (A. th genome BLAST matches underlined) | >23-K031461-022-915-G03-8409 TCCACATTTGAAACTCCCACTTGGTACTTAATTATGGCATCCTCCCTATGGTGAGTTCTT TTTCTCATTTTTTATTGTTTTTTTTTATTACGGCTGTTGTGATCTTTTGTTTTTTTTTTT TTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTCTGTTTTTATTTTTTTTTTT TTGATTTTTTTTTGTGGCTTTAGTGAGAGGGCGTGTGGNAGTTGTGTGATAAAAGAAAGA AAGAAAACG |
| GenBank Accession | FR817860 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17136229 - go to primer design |
| BLAST e Value | 9e-04 |
| Hit Clone Code (BAC ID) | F12A12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit F5M6
| Sequence (A. th genome BLAST matches underlined) | >23-K114401-0022-915-G03-8409 GTGATTGTCGACCNTCGAAATCAGATGTCCGAATTAAAAAACTTAGTTTATTGCTTTCGC CTATCATTACGACAGATCGTATTTTGTCCTTTTGCAAAGTGTACTTTCATTTTATAATAA CGCTGCGTACATCTCCATTTTTGAATTGATAAAAAATTGGTAATTACGCTTTCTTTTCCT CCATATTGCCCATTCTACTCAATACACGTTCCTTTTGAGTTGTAGTTCATGTTCCTTTTT ACACATACTTTTCACTCCATAGTTAGATCACATTCCATTTATGTAAATAGGAAAATATTT AGATTTCATAATAATTGTGTAAATTAACAAAAACAATTCCTAAACTACCATTTTCCTAAT TATGGTTTCAAACTACCATCAAAATCTTAAAATTCCAACATTTGTATATTGCGATATACA ATTTTGGTCTCAAAACTTGCTGAGTTTGCTGGAAACGAGTGAGAGAAGAGTTGTCGTTCT AACCTGCGCGGCCGCTAAAA |
| GenBank Accession | HE665897 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:11442649 - go to primer design |
| BLAST e Value | 2e-133 |
| Hit Clone Code (BAC ID) | F5M6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At2g22980
| Sequence (A. th genome BLAST matches underlined) | >23-K114403-0022-915-G03-8409 ATTTCGCAGTCTTTTTTATTGTACTCTAAGGAGAATACAACGCTGCGGTTGACCCCAAAT TACGTGCTTTTGATAGTATCGTATGTCCTCTTATCTGGATTAACTTCTCGTGTATCAGAC ACGATTCAAAGGCCATAATGATTTTTATGTGAGTTTGATAACTGTGTGATACGACTAACC TGCCCGGCCGCTACACAATTTGCCTCCCCTCGCCTGCAATCCCAACATCAGCCTGACGTG ACAAAAGTGAAATACCCTTAATCATGACACATTACTCTATACTGCGATACTAACCTGCCC GGCCGCTAAAAATTCCNACGTTTGGATATTGCGATATTCTATTTTGGTCGCCAAACCTGC TGAGTTTGCTGGAACCAAGTGAGAAAAGAGTTGTCTGTCCTCACCTGCCAGGCCGCTATC NACTACCCTGCCCGGCCGCT |
| GenBank Accession | HE665898 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:9783030 - go to primer design |
| BLAST e Value | 7e-19 |
| Hit Clone Code (BAC ID) | T20K9 |
| Hit Gene Code | At2g22980 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | serine carboxypeptidase-like 13 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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