SimpleSearch - Line and FST details


Line specific information

 
Line ID 917G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N488010)
Segregation Analysis 50:49:37
Confirmed for Hit At4g09610
Parent of DUPLO pair none
Parent of pair(s) 11135, 57812

Gene hit At2g36530

 
Sequence (A. th genome BLAST matches underlined) 
>15-K030988-022-917-G02-8409
GNAGCCATTTACAATTGAATATATTCGGAGATAGTATTGTCGCAGATGGATTGCTGGTGA
ACTAACATGCTGTAACCTGGGTTAAGGCTAACCCCTCTAGATTCGCATATGTTTTTCCAG
TCTGTGATTAAGAAGAAGTATGGGATCCTCCCTATAGTGAGACNTATTANTCNTNT
GenBank Accession CT027299 [GenBank]
Graphic View Graphic view of gene At2g36530
Predicted Position of Insertion Chr2:15322366 - go to primer design
BLAST e Value 2e-11
Hit Clone Code (BAC ID) F1O11
Hit Gene Code At2g36530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Enolase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g09610

 
Sequence (A. th genome BLAST matches underlined) 
>15-K030987-022-917-G02-8409
ACATGAAGCCATTACAATTGAATATATTCAAACACTGATAGTTTAAACCGAAGGCGGGAA
ACGACAATCTGATCCCCGGGTATGGGATCCTCCCTATAGTGAGTCTTATTACTCCCCCGC
TGATGGAGCACACGTCGGTGAAGGCCTAGTGAACATCGGTATGTAACCCTAACTTATATA
TAACACGTTGGTATATAACTTAATATTTCGGGGGGGGGGGGGCTCTTCCCAACTTATATA
TATCTTTNTTATGGAAAATGTCNNCAGCTTTTAATGAGATGTTATATCTCGGAGGAGGAG
ACTATGGAGCTAAAGCTTTGGATTCCTTTGCAACAGAAAGAAGATTTGGGAGGGGTCAAA
CGGAATAGATTAAAGGGCGGCGTGGGAGGGAGAAAGAGAAGGA
GenBank Accession CT027298 [GenBank]
Graphic View Graphic view of gene At4g09610
Predicted Position of Insertion Chr4:6075481 - go to primer design
BLAST e Value 8e-60
Hit Clone Code (BAC ID) T25P22
Hit Gene Code At4g09610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GAST1 protein homolog 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37