SimpleSearch - Line and FST details


Line specific information

 
Line ID 920C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N488257)
Segregation Analysis 50:44:30
Confirmed for Hit At5g26670
Parent of DUPLO pair none
Parent of pair(s) 5510, 5521, 5564, 5648, 5708, 8716, 88095

Gene hit F21E10

 
Sequence (A. th genome BLAST matches underlined) 
>67-K030993-022-920-C09-8409
TCCAAGTAGCACATTTCTCTGATTGATGTTAGGTGAAACTGATATGTATAAACAGAACAG
CTGTTTGAATCTAAGTCTTAGGTGTCCTAATTACTAGGTTTGTTTGGATGGTATGCGGAT
CCCCCCAATAGGTGAGTCAGAATACTCCTATATTTTTTCTTACAACCATTACTAATTTTG
AAAAGAATGATTCAAATTAAGTAAGAGATCTGGATTCCTTGTGCAGGATCTATTGGTATG
GGATCCTCCCTATAGTGAGTCNNANTNNNNNNNNNNNNNNNNN
GenBank Accession CT027492 [GenBank]
Graphic View Graphic view of sequence CT027492 of line 920C09
Predicted Position of Insertion Chr5:9317444 - go to primer design
BLAST e Value 4e-40
Hit Clone Code (BAC ID) F21E10
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g26670

 
Sequence (A. th genome BLAST matches underlined) 
>67-K030994-022-920-C09-8409
AGAAAAAAAGTCTCGTTGAAGGAAAAAGCAGAGAGAAAGAGACTGTATGTGGATCCTCCC
TATAGTGAGTCCTATTACTCATTCCT
GenBank Accession CT027493 [GenBank]
Graphic View Graphic view of gene At5g26670
Predicted Position of Insertion Chr5:9318713 - go to primer design
BLAST e Value 6e-08
Hit Clone Code (BAC ID) F21E10
Hit Gene Code At5g26670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectinacetylesterase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37