SimpleSearch - Line and FST details


Line specific information

 
Line ID 920E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N488276)
Segregation Analysis 11:10:10
Confirmed for Hit At1g09640
Parent of DUPLO pair 11934
Parent of pair(s) none

Gene hit At1g09640

 
Sequence (A. th genome BLAST matches underlined) 
>29-K030993-022-920-E04-8409
AATTTATTATGTATTGTTTGATCCACCAACCTTGTTGAGCGTGACAAATGACACCATGTT
CTCATCGTTGTATGGGATCCTCCCTATAGTGAGTCATATTACTCATCAACGTATTGATCC
ACATGGGACTTTTAACATCATCCGTCGGATGGCGTTGCGAGAGAAGCAGTCNATCCGTGA
GATCAGCCGACGCACCGGGCAGGCGCGCAACACAATCGCAAAGTATTTGAACGCAGGTAT
GGGATCCTCCCTATATTGAGTCCNATTANGCGATCATCCATAAAGNGAAGGGTCTTAATA
TAGGGAGGGTACATGTCCGCCAGGTTAATAGTGATTGGAAAGAAGCGATAAGGGAGNGGG
AAGGAAGAAAAAAGAGGGGGGGGGGGAAAAGAAACCGAAAGTGAGAGGAGAACAGCGAAG
CTGTAGTGAAACAGAAAACGGGACAGTAAACGAATAAAAGAGATGGAAAACACTAAAGTA
TAAAGATGAGAAAAAGAATGATCACATAACCCAAGCAGAGAGTGGTAAAAATG
GenBank Accession CT027513 [GenBank]
Graphic View Graphic view of gene At1g09640
Predicted Position of Insertion Chr1:3121927 - go to primer design
BLAST e Value 7e-20
Hit Clone Code (BAC ID) F21M12
Hit Gene Code At1g09640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Translation elongation factor EF1B, gamma chain
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR817907 [GenBank]


Last Updated on 10.06.2021 13:37