SimpleSearch - Line and FST details


Line specific information

 
Line ID 923C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N488547)
Segregation Analysis 50:47:41
Confirmed for Hit At5g52540
Parent of DUPLO pair 2119
Parent of pair(s) none

Gene hit At5g52540

 
Sequence (A. th genome BLAST matches underlined) 
>83-K031999-022-923-C11-8409
CGGAATCTTCATCTCCGATCTGATCCGTTACTGTGATTTCGTTCAGTATGGATCCCTCTC
TATATCGCGCACAAATAGTGTTGGAATCTCTCCTATAAGGGAGCCGATTTACCCATCTCT
TTTTCAATCTCGCTATGGAGAGATCCATATGGTACTTTTAAACATCATCCGTCGGATGGC
GTTGCGAGAGAATCATTCGATCCGTGAGATCATCCGACGCACCGGTGCAGGCGCGCACAC
GATCGCAAAGTATTTGAACGCATGTATGGGATCCTCCCTATAGTGAGTCTTATTATTCAT
TTTTTTTTTTTTTTTTCCTTTTATGTTTTTTTTTTTTGTTTCTTTTTCTCCTTTTTTCTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTAGTTGTAAAA
ATCTTTTATTTTTTTAACTTTTTTGGGTTTTATCTAGTATTATTTAGTTTTTTACTTANG
TTATGTAACCGGGATATTCGTCGCAAGGAGGTTAGTATTTATCTTTTGAAATGATAAGAA
TAGAAANATATATTTATTANTGT
GenBank Accession FR817926 [GenBank]
Graphic View Graphic view of gene At5g52540
Predicted Position of Insertion Chr5:21323506 - go to primer design
BLAST e Value 1e-06
Hit Clone Code (BAC ID) T4M5
Hit Gene Code At5g52540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation keratin-associated protein, putative (DUF819)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37