SimpleSearch - Line and FST details
Line specific information
| Line ID | 925B11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N488727) |
| Segregation Analysis | 50:46:36 |
| Confirmed for Hit | At4g21560 |
| Parent of DUPLO pair | 9490 |
| Parent of pair(s) | none |
Gene hit At4g21560
| Sequence (A. th genome BLAST matches underlined) | >82-K031610-022-925-B11-8409 AGGAGCATCCACATTGTATAGTATCCTGCCAGGTGAGGGAGCCGCGCGTGCCACTCTGTC TCATACCCGGGTATGGGAGCCCCCCCATAGTGAGACGCAGTAGCCGCTTCCCTACNTGAT CGTCCGCGCAAAATCCGGTGGCNATATACTTAATTGGNNNNGAGAANCCGAGAGATCAGA CNNCNACGGATACACCTGANCAACAGCAGCCATGTTGAGTTTCAAANAATCCNGGGAAGT GANGAA |
| GenBank Accession | CT954616 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:11469087 - go to primer design |
| BLAST e Value | 5e-21 |
| Hit Clone Code (BAC ID) | F18E5 |
| Hit Gene Code | At4g21560 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | vacuolar protein sorting-associated protein-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g29975
| Sequence (A. th genome BLAST matches underlined) | >82-K113657-0022-925-B11-8409 AGTGAGGTTTGTGAGGATCAGATATAGTGTCGGTGGGGACAGATAGGGTTACATCGAGTG CCTCGTTGTCTCGCTAGAATTCGCCATTAATAATTCCCTTGGTGTGCACCAGTGCTTCTT CTTCTCCTCCCCTGTCTTCTACCGACAATAGGCAACTACGATCTAAAAAAAAAAAAAACT ATATTAGAATTTCCTGCCCTGTATATTCATTCTTACGAGAATCCTAGTTCTCTCCCCGTG CTCAGCGACAAAACCACCCGCCGATAATATAAAAAACACATTCACAGCTCTCAGGCGTGT TTTCTTCCCCTCTACGAAGATCCACGCATCCACGAGGGGAAATAATTGTGTTACCTACTA AAGATAAGGACAACTCATTTTAGCGCCCATGTCCTAGAATATCATATCTCGTTCTTCGGC ATCTCTATACTCTAGTTAATACTAGCGCCCACCTGTAACATAACAAAAGGTCAAGACAAA TCTTTGATTTGAATCCTCTGCATCGCGCTCAGTAATACGTATGAGATAATGCCCCTAGAT CTGGGTATAACTCTACGCCAGCACAGAATCTCCCTCTTGTGATTCCTGGCTGTTACCCCT GTATGGTCTTAACCTGCCAACGCACTCCACCCTTGCTCACTGGCCTGTATTCTAATACAG CTCCCGAACAGCTCACACGTCTGCTGCACGCTAAATTCGTACTAACTCACCCGGATACCT CCAACAACTTACTTCTGATCTAATGCCATTGTTCTTGCGAGTCAACCTAACGATCCGTGA CGCTCAGCTGCGTCTCGCTAGGTCCGTTCTCGCCCCGACCAGTGTTTATAACTGTGTAAC TTACCTGCATTCAGCAGCTTGCCTCTTATCCCTAGTGAGTTCCCTAGAAGTTCTTGCATC GCTGAAATGAAGCACCTGTCGCTATGGCTATGTTATAGACCATTGGCTCTCTATATTTCT TCTCCCTGCTCGTGTATCATTTCCCTCTTTCGGTATTGAACGTACGCCTGAGTAGTATGT ACCGACATAATCTGATCTGCTAATACATCTGTCCTTTTCTCTGTATGAAACTTTTCCCGA TTCCCAGATACCGTATCTGTCACTCAGTTGTCTGTGTACCTTCCTTCCTCTTTGTCCTAG TCGTAGTTGTGTGTCACACCGCTTTCTCTGTTTGCGCACGTTGTACTGGTACACGACAAT CGTATAAGTTCACATGATCTGTTCCACCGCTCGTTCTTATACCTATGGCCATTCATGCTC TATGCATCAAACTGTTGTCCACCTGCCTTACGCTACTTAAGTTACTTTCTCCTTTTGTCC GTAC |
| GenBank Accession | HE665949 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:11326426 - go to primer design |
| BLAST e Value | 4e-11 |
| Hit Clone Code (BAC ID) | T3P01 |
| Hit Gene Code | At5g29975 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
