SimpleSearch - Line and FST details


Line specific information

 
Line ID 926A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N488806)
Segregation Analysis 50:42:31
Confirmed for Hit At2g24000
Parent of DUPLO pair none
Parent of pair(s) 1041, 6207, 6218, 8825, 10569, 10572, 73725, 73777, 73811, 73813, 73814, 73819, 73823

Gene hit F28N5

 
Sequence (A. th genome BLAST matches underlined) 
>41-K113442-0022-926-A06-8409
ACCAACCTTCTTCATGCTTCCCATACCTTTCATGGTGTAACCTGATTTCACATTGCGCGA
CACCCATACCTAGGCGCAAATCAGGCCTAACCCGCCCTGCCGCTACATGGATATTTCCCG
GACATGAACCCATTTACTTTTGAATAGATCCTGACTTGATTTGCTTTGAAATGATTTATC
CAAAACCACTAACTTGTGCGACCCCAAATTTCTCTCGTCGAACAAATCATGACCAACCAC
GTTGAATTTACCGTCCTTCTTCTAGCTTGCTCCAGCCTTTAATGGTGTACCCTAATTTCG
CAGTCGCTACGCACCATACCGAGGGTCTAATCATGCCTAACCTGCCCGGCCG
GenBank Accession HE666033 [GenBank]
Graphic View Graphic view of sequence HE666033 of line 926A06
Predicted Position of Insertion Chr5:11703886 - go to primer design
BLAST e Value 8e-06
Hit Clone Code (BAC ID) F28N5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g24000

 
Sequence (A. th genome BLAST matches underlined) 
>41-K031611-022-926-A06-8409
TCCATTTTTAATTTGATGACGATTTTATTTCGGNNGGGGANCCNCCCNANNNNGANNCNN
ANNANNNNNTCCCCNAAAANNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGG
GGGNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNANNNNGANNNNGGGAAANNGNNAGGNNNGAGAAGGGGAGAA
GAAGAGGAGGGNGGAGGGGGAGAAAGAGGGGGAAGGGGANAGGGAGAGAAGAGGGGGAGG
GAGGGGCGAGACAGAAGCCGGGAGGAGGCAGGGGGGGGGGGGGGAGCGAAACGAACAGAA
CGCGGCCCCCCCCCCCCAGAGCGGCCCACGGGGCACAACAAAAGACACAGAC
GenBank Accession FR817946 [GenBank]
Graphic View Graphic view of gene At2g24000
Predicted Position of Insertion Chr2:10210508 - go to primer design
BLAST e Value 4e-06
Hit Clone Code (BAC ID) T29E15
Hit Gene Code At2g24000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 22
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR817946 [GenBank]


Last Updated on 10.06.2021 13:37