SimpleSearch - Line and FST details


Line specific information

 
Line ID 928G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N489066)
Segregation Analysis 50:48:46
Confirmed for Hit At1g57870
Parent of DUPLO pair none
Parent of pair(s) 7449, 42951, 84628, 84629, 84630, 84631, 84632, 84633, 84634

Gene hit At1g57870

 
Sequence (A. th genome BLAST matches underlined) 
>15-K113942-0022-928-G02-8409
TTTGAATTGAGAAACAATAGGTGATTACTCTTTCTTTTTCTCCCCATTGACTCATCATCC
GCGTTGCTGATCCATGTAGATTTCGTTCACATCAATCCACTTACAACTCTAACCTGCCCC
GTCTCTAATTTCTTTCTTCTATCTTCCCTGTTCTATTCCTTATAACGGAAGAAAATTAAT
ATATGTTATTCATAACCATGAGATCCGAAGAACTCTCTGATATCCCTCCTGACACTGAGG
ACTGCACTTGTCCCCTAATATGCCCGTAA
GenBank Accession HE666307 [GenBank]
Graphic View Graphic view of gene At1g57870
Predicted Position of Insertion Chr1:21431784 - go to primer design
BLAST e Value 6e-07
Hit Clone Code (BAC ID) F12K22
Hit Gene Code At1g57870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation shaggy-like kinase 42
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HE666307 [GenBank]

Gene hit At3g32275

 
Sequence (A. th genome BLAST matches underlined) 
>15-K031615-022-928-G02-8409
TGGATATAGATCATTCCCATTATTCAGAGGTCTTTTCGCATCGGATTGTTANNCTGATGC
NCGTCTCANTATCTTCTCCAGATTCAACATTCTCACTGTAATATGTGACGTTTTGAAAGG
TATGGGATCCTCCC
GenBank Accession CT954685 [GenBank]
Graphic View Graphic view of gene At3g32275
Predicted Position of Insertion Chr3:13231443 - go to primer design
BLAST e Value 2e-32
Hit Clone Code (BAC ID) F6H5
Hit Gene Code At3g32275 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit HE666308 [GenBank]

Gene hit At3g31810

 
Sequence (A. th genome BLAST matches underlined) 
>15-K031615-022-928-G02-8409
TGGATATAGATCATTCCCATTATTCAGAGGTCTTTTCGCATCGGATTGTTANNCTGATGC
NCGTCTCANTATCTTCTCCAGATTCAACATTCTCACTGTAATATGTGACGTTTTGAAAGG
TATGGGATCCTCCC
GenBank Accession CT954685 [GenBank]
Graphic View Graphic view of gene At3g31810
Predicted Position of Insertion Chr3:12868817 - go to primer design
BLAST e Value 2e-32
Hit Clone Code (BAC ID) T1O13
Hit Gene Code At3g31810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37