SimpleSearch - Line and FST details


Line specific information

 
Line ID 929C12
Vector Used pAC161
Line Availability available as T3 set from NASC (N489124)
Segregation Analysis 50:49:36
Confirmed for Hit At2g15970
Parent of DUPLO pair none
Parent of pair(s) 1736, 2873

Gene hit At2g15970

 
Sequence (A. th genome BLAST matches underlined) 
>91-K031618-022-929-C12-8409
AGCCATTTACAATGNAATATATCCTGACAGCTTGATGTCGAGAGAGGGCCCGCTCAGCCC
TGAGCGAGTGGCCGGTATCTGATCATCCCTTATTCGAAGCGTAGTATTCCAATTCGTATT
ACTCATGCGGATTCGGAATGGCCTAAGATAAGAACTGGGTGCCACGAGAGTTACAAGATC
CANGGCCACCGTGTTATTTCNGGCAGGCGAAGAAGGCGAACTATTNANATAGGCCGAATC
ACAATCCAAGTCGTGTTGCTTGGAATGGAGAGTGAATGAAAAAAAGTAGACAAACCTCTG
GCGTGTTAAGGAAAGAAGAGTTGTANGGGATCCT
GenBank Accession CT954704 [GenBank]
Graphic View Graphic view of gene At2g15970
Predicted Position of Insertion Chr2:6950952 - go to primer design
BLAST e Value 1e-18
Hit Clone Code (BAC ID) F19G14
Hit Gene Code At2g15970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cold regulated 413 plasma membrane 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g22450

 
Sequence (A. th genome BLAST matches underlined) 
>91-K113509-0022-929-C12-8409
CATATACGACGGATCGTAATTTGTCGTTTTATCAAAATGTACTTTCATTTTATAATAACG
CTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCC
ATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTAC
AATTGAATATAACCTGTCCAATTGAAGATGACATACATGATGTTATATACACTCCTAACC
TGCCCGGCCGCTAATAAANNNGTTTNTTCGTTTGTCCNGTTGTTAGATGCTGCCNNCCGC
GGGGTTCCCCTCGGGAGTGCTTGTCNTTCCCTGCGATAATGACTTCTGTTCAACCACCCC
AACATCAGAAAGCCTGACGACGGANCAGCATTCCAAAAAATATCCCTTGGCTCATCTGGG
TCGACTA
GenBank Accession HE666374 [GenBank]
Graphic View Graphic view of gene At3g22450
Predicted Position of Insertion Chr3:7962958 - go to primer design
BLAST e Value 6e-10
Hit Clone Code (BAC ID) MCB17
Hit Gene Code At3g22450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal L18p/L5e family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37