SimpleSearch - Line and FST details


Line specific information

 
Line ID 930G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N489265)
Segregation Analysis 50:50:39
Confirmed for Hit At1g54940
Parent of DUPLO pair 12373
Parent of pair(s) none

Gene hit At1g54940

 
Sequence (A. th genome BLAST matches underlined) 
>71-K032000-022-930-G09-8409
AACCATTTACATTGAATATGTCCTGGACATCTAACGGAAACGACAATCCGCTCCCCGGGT
ATGGGATCCTCCCTATAGTGAGACGTATTACTCCTCCGGAATCATGGTAATGCAGCCAAA
TACTGGTCTTAAATTAATTTTACTTTTTTGGTAAAACGTTCTAAATGATAAAAAATGATA
TGGTCATCTATATATGTTGACGTATTTGGCCTAAAAATACTAAATATTTTAAACAAAATT
CATGCCACACATCCCTTGAACAGAATTTGTTGAAAATTGGTTTGTTTTTGGTTTGCTGAT
CAAATATTCTTTTTTTTTTTCGGCCTAAAAAAACAATTTTTTTTTTTTTTAAAAAAAAAA
ATTTTATTTTTGGGGTTTTTGGGGGAAAAAATTTTTTTACCAAAAAAGGTGGGGACCCCC
CCCAAAGGGGGGGCGATTAACCCCCCCTGTTTTGAACCCCCGCAGGAAAAAAACGGAATA
TTCCTATTGTGGGAAACCGAAAGTCGGATATAAGTAAAGACGCTAANAAAAAGGTAGGAT
ATTGGATCGATAACGAATTGNGAAAAAAAACAAAGATAAACAGAAAAAGACATAA
GenBank Accession CT954794 [GenBank]
Graphic View Graphic view of gene At1g54940
Predicted Position of Insertion Chr1:20483649 - go to primer design
BLAST e Value 7e-119
Hit Clone Code (BAC ID) F14C21
Hit Gene Code At1g54940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant glycogenin-like starch initiation protein 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37