SimpleSearch - Line and FST details


Line specific information

 
Line ID 932F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N489444)
Segregation Analysis 50:49:47
Confirmed for Hit At1g08350
Parent of DUPLO pair none
Parent of pair(s) 65243, 95572, 95574

Gene hit F2I9

 
Sequence (A. th genome BLAST matches underlined) 
>62-K032031-022-932-F08-8409
TATTCATTCACTTAAAGTTCCATGTTCCATATGGAATCCTCCCCCTTTTGAGACTCATGG
TCCTATATTTTAATGAGCCGGCCCTGGTTCCATGTAACGAAGAGCAACTCCTAAACATCT
TTGCCAAGCTTCGTATACGTATGGGATCCTCCCTATAGTGAGACCTATTACTAATTACTC
TTTCTTTTTCGCCGTAGGGACCATCATTTTTTTTACAAAATGGGGTGTGTTTCGTGTTGA
TTAT
GenBank Accession CT954972 [GenBank]
Graphic View Graphic view of sequence CT954972 of line 932F08
Predicted Position of Insertion Chr2:260718 - go to primer design
BLAST e Value 1e-37
Hit Clone Code (BAC ID) F2I9
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g08350

 
Sequence (A. th genome BLAST matches underlined) 
>62-K031917-022-932-F08-8409
ATTGATCCATGTGGAGGGAGATTATTTTGGGTCAGGGGCACAAGCATACTATGTATTATA
TATTCAGTCACTTAAAGTTCAATGTTCTGTATGGGATCCTCCCTATAGTGAGACGTATTA
CTCNCTCCCTTTTCCAATACCCCCTTCTTACATCTCTCTTTTCCCCCCTCTTTTCCCTCT
TTCCCCTCCTTCTTTTTCTTTTTCCATCTTCCCTATTCTTTTTCTTATTCCTCTTCTCCT
TTTCTCCCCTCCCTCTCCTTCCCATTTTTCTCCTCCCATTATCCTTTTCT
GenBank Accession CT954971 [GenBank]
Graphic View Graphic view of gene At1g08350
Predicted Position of Insertion Chr1:2634884 - go to primer design
BLAST e Value 8e-22
Hit Clone Code (BAC ID) T27G7
Hit Gene Code At1g08350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Endomembrane protein 70 protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37