SimpleSearch - Line and FST details
Line specific information
| Line ID | 932H05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N489465) |
| Segregation Analysis | 50:40:35 |
| Confirmed for Hit | At1g52930 |
| Parent of DUPLO pair | 400 |
| Parent of pair(s) | none |
Gene hit At1g52930
| Sequence (A. th genome BLAST matches underlined) | >40-K032031-022-932-H05-8409 TTGAACAATCTGGCTATGGGATCCATCCCTATAGTGAGTCTCTATTACTCACATTTCTTT TTAGAATATCCCCTACGGACATCCCTTTTCTCCTTTCCATTCGAACATCCTGTTCGAAAG ATTTTTGAGTCCACCCTCAGAGTAGTATAGGTGCGACTTTGAATGANCTCCTTGTGCTTA ATAACTCTGAGTCCTGCTTGTTCTTCNAGGTATTGTTTCCTTCTTACTTATTTCTAGGCT TANTTTTTGTTCCATGTANTCCTATTTGTTCCTTTACTGTGNAATGTTTNACTCAAANGT CAAACCNCAGAAACTTGNGATT |
| GenBank Accession | CT954992 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19711443 - go to primer design |
| BLAST e Value | 3e-50 |
| Hit Clone Code (BAC ID) | F14G24 |
| Hit Gene Code | At1g52930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ribosomal RNA processing Brix domain protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T5I7
| Sequence (A. th genome BLAST matches underlined) | >40-K031917-022-932-H05-8409 TAGTCAACATGCTTTCATATATAGCGACGTGAAAATCATATTGTGGGATTTAATGAGAAA TTGAACAATCTGGTATGGGATCCTCCCTATAGTGAGACGTATTACTCACGTCCTTTTCGA ATAACCCCTACTGACATCCCTTTTATCCTCCCCCTTCTACCACACTTTATAAAATACCTT TAACTTAACCCCAACAATACCCTATTCCCCACTTTTAATTACCTCATTAACCTTACCAAT TCTACTTCCTCCTTCTTCTCCTACCTAAATTTTCCATCTTACCTATTTCTACTCTTAATT TTTCTTCCATCTACTCATATTTCTTCCTTTACTAATTAATCTTTAACCCCAAACTCAAAC CTCAAAAACTTCTCATTATAATACTCCATTTAATCTTATTTATATTCATATTCATACAAA TCAACAATCTTTCCCTCTAATTCTATTTACTATTTCTTCCCTCTCATCACAATTTTATAC TTATCCCACATTCTTCTCTCTTCCTTCTTTCTCCAACCTTAATATAT |
| GenBank Accession | CT954991 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:16586278 - go to primer design |
| BLAST e Value | 3e-27 |
| Hit Clone Code (BAC ID) | T5I7 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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