SimpleSearch - Line and FST details


Line specific information

 
Line ID 939H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N490133)
Segregation Analysis 50:45:31
Confirmed for Hit At1g08990
Parent of DUPLO pair 12373
Parent of pair(s) none

Gene hit At1g08990

 
Sequence (A. th genome BLAST matches underlined) 
>08-K101630-0022-939-H01-8409
AGCATTTACATTGGATACAGACAAGAACAGAAATCTCACATCCGAAAAAACTACATTATC
ATCATTTACTGCCCAACGTGTCGCTTACGTGACGTTACTACACTCATCGGAGGTATACGT
ATGCGGAGACTATAGCCTAGGCACAAAGCATAGGGCAATCTGGATCAACCAGGGACATGA
TTCTCCTCCCCAAGGACTTTTTAACCAACATCTTTTTAATTGGCCTAAGCTTTGCTGGTT
GGAAACTACGGCAAGGGGGGAGAATTCGAAGCCCTTTTTCCAGGAGGCGTCCTTCCAATG
GGGGGAATTCCGGTAGGTAACGGGTGTGGCAGGTGACAAATTACAACAAACAATGGAACC
CTCCCAATGGGGGGCCGTTTTATTCCCCGCCTTAGGGGGTAATGAGGGTTGAAGTGGGGG
GAGGGCGAATGGGGGGGGGGGAGGGGGGGAGCGCGAATGGGATGATGAGGGTGGAGGGAG
CAGGATGGAGGCCGTAAGGGATGGGACGGACGAGTTGTGGGGGCAGCGAAGTGGGGATAG
GGAATAGGTGAAGGGATGTGCGACTGCAGGTGAAAGAGGGGGAGGATGGGGAGATAAGAG
GGTGAGAGAGTAGATGGGTTGAGCGAGAATGAGATGGGTGAGGGGGAAAGAGAAGGAGGG
GCAAAGGTGATATGTGATGGGGGAGCTGGGTGAAAAGGGGGGAGTGGCGAGAGGGTTAGG
GGGGAGTGGGGAGAGAGAAGGGGAAGAGGCACGGCGTGCACTGGTGGGAGGCAGATTAGT
AGTAGAAGATGGGAGGAGACAGACGGAGGGGAAGACTGAGGTAAATTCTAGAGCGAGATA
GAAGGATGAGGGAGAGAGGGGAGCAATGAGGAGGGGGTTAGGAGGGGGTAGGGAGGAGCG
ATTGGAGAGGGAGATGAGGTGGAGGAGGAGAGTGGAGGAGGGGATGAGTAAGTAGAAGGT
GAGACGTTGGTGTAGGGATGAGAGAGAAGGGGGGTCGGGGGGGTGTGGGGCGCGGAGAGA
GGCGAGAGAGGCGTGGGGTGTGTGGACGGGGAGTGGAAGGTGTGTAACGGACGCGGAAGT
GAGTGGTCGTAAGGGAGGGGGGAGTGGGTGAAAGAGGAATTGGTGAAGAGCAGGGTGGAA
GAGTGGGGTGCTGAGAGTGGGGCGAGGTTGTGTGGATAGATGAGCGGAGTGGGTAAATGG
CAGTAGTGGAGGTGGAAGAGCAGAGAGGAGAGTGGAGA
GenBank Accession CU458247 [GenBank]
Graphic View Graphic view of gene At1g08990
Predicted Position of Insertion Chr1:2889660 - go to primer design
BLAST e Value 5e-100
Hit Clone Code (BAC ID) F7G19
Hit Gene Code At1g08990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant glycogenin-like starch initiation protein 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37