SimpleSearch - Line and FST details


Line specific information

 
Line ID 944B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N490550)
Segregation Analysis 50:45:44
Confirmed for Hit At3g48400
Parent of DUPLO pair none
Parent of pair(s) 95583

Gene hit At5g28100

 
Sequence (A. th genome BLAST matches underlined) 
>74-K032857-022-944-B10-8409
AATCCCCGGGTTAGCGGCTCTCTCTGCTCTGAGAAGAGCAGTATGGTATGGGATCCTCCC
TATAGTGAGAGTGATTGTTCCCCCCATCTTTGTGATCGACGGGGCAACGGAGTGATCCAC
ATGGGACTTTTAAACATCATCCGTCGGATGGCGTTGCGAGAGAAGCAGTCGATCCGTGAG
ATCAGCCGACGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATTTGAACGCAGGTATG
GGATCCTCCCTATAGTGAGACCTATTGNTCNTTNCTCTTTCTTTTT
GenBank Accession CT955395 [GenBank]
Graphic View Graphic view of gene At5g28100
Predicted Position of Insertion Chr5:10106127 - go to primer design
BLAST e Value 6e-05
Hit Clone Code (BAC ID) T24G3
Hit Gene Code At5g28100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At3g48400

 
Sequence (A. th genome BLAST matches underlined) 
>74-K032906-022-944-B10-8409
NNAGCCATTTACAATTGTAATATATCCTGTTCCCGATCGACCCGGGCGTTCGGCACATGG
GATCACCGACCTTTGCGGCGTCTCTCTAGCTCTGACAAAAGCAGTATAGTATGGGATCCT
CCCTATAGTGAGAGGGATTCCTCCCCCCTTCTTTGTGTAACGCCGTGCCAACTCACTGAT
CCAATTGGTCACTTTTAAACCTCGTCCGTCGGATGGCGTTGCGAGATAATCACTCCATCC
GTGAGATCCACCGAGGCACCGGGCAGGCGCACAGCGCAATCTCTCAGTATTTGGACGCTG
GTATGGGATCCTCCTTATTCTTGCTCTCATTGTCCCAACTATGTTGTTCATCCACAATGT
GCAATGAAAGATGATGTATGGGACGGAATAGAACTCGAAGGGACTCCTGAAGATAGTGAG
CAAGATACCGCGCCATTCGAGGTGGTTGATGACAACACGATAAAACATTTCAGCCATGAA
AAACATAATTTGATGCTCAACAAGAATGGTATCATCACTCAACATGATGAAATCACACGT
TGCCAAGCATGTGTCCTTCCTCTATCGTCAGATCCTAGCTACAGTTGTGGTCAATGTGAT
TATGTT
GenBank Accession CT955396 [GenBank]
Graphic View Graphic view of gene At3g48400
Predicted Position of Insertion Chr3:17924360 - go to primer design
BLAST e Value 7e-162
Hit Clone Code (BAC ID) T29H11
Hit Gene Code At3g48400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37