SimpleSearch - Line and FST details


Line specific information

 
Line ID 945E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N490678)
Segregation Analysis 50:44:40
Confirmed for Hit At1g62580
Parent of DUPLO pair none
Parent of pair(s) 91878, 91887, 91895, 91916, 91925, 91930, 91937, 91940, 91943, 91946, 91951, 91953

Gene hit T2H7

 
Sequence (A. th genome BLAST matches underlined) 
>45-K032907-022-945-E06-8409
TACNTAAAACCTTATATATTTCTGGACAATACCAGAAACGTCCACTAGGGATGACTATGA
CATTAACTAAAAAAAACTATAATATCCACACAAAATTGTCGTAGATTTGGTTGATAATTG
ATTAATAACTAAGTATGGGATCCTCCCTATAGTGAGACCTATTGGTANTTACTCTTTCTT
TTTCCC
GenBank Accession CT955484 [GenBank]
Graphic View Graphic view of sequence CT955484 of line 945E06
Predicted Position of Insertion Chr1:10622568 - go to primer design
BLAST e Value 2e-54
Hit Clone Code (BAC ID) T2H7
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g62580

 
Sequence (A. th genome BLAST matches underlined) 
>45-K032878-022-945-E06-8409
GTTTTTGACTTCGTGATGAATTAGATTGCTTTGATTCGGTAAAGATGAACCACTCGGTAT
TGGCCTACACCAGGGTGATCTTTGTTAAATGCATATGATCCTCCTACGCCTGAGACCTAT
TCTCTGATTTAATTATCTAACAAAACCCACTAACACTTATGTTTTGCTGACTACTTTTTA
TTCAAAAACATTTACATCTTCTTCTGCCAAAATCATTTCGTAAGACATCCCAAAACCCTT
GGAATAATGATTCCATGAATGAAGAATCCTAATTTGAATATACCAAGAGGTTTTGAAAAG
TTTTAAGTTTTTGATAGGTGTGTATGTGAAAAGGTATG
GenBank Accession CT955483 [GenBank]
Graphic View Graphic view of gene At1g62580
Predicted Position of Insertion Chr1:23174975 - go to primer design
BLAST e Value 9e-103
Hit Clone Code (BAC ID) T3P18
Hit Gene Code At1g62580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation flavin containing monooxygenase FMO GS-OX-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37