SimpleSearch - Line and FST details


Line specific information

 
Line ID 947G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N490899)
Segregation Analysis 50:29:22
Confirmed for Hit At5g38650
Parent of DUPLO pair 512
Parent of pair(s) none

Gene hit At5g38650

 
Sequence (A. th genome BLAST matches underlined) 
>87-K032890-022-947-G11-8409
TATGTCATCATTTTCATTTCCTAATCGGAATCACTTTTACGATCTCAAAAGTGCATTTAA
TTATACGTAGGGAATCCGCCTTAGAATGTGTGAGAATCTTCCTTAGGCTTTATAGAAAAC
CGTTCAGATTGAAATATGGTTTCCTAATGCTAGTAATCTATCTTGATTAGGTCAATTGCT
GTTCGGAATTTTGAAATATTGTTAGTATGGCATCTCTACTAATTGTGGCCGGGAAGCTAG
AGTAAGTAATTCGCCAGTTAATAGTTTGCACAACGTTGTTGCCATTGCTACAGGCATCGT
GGTGTCAAGCTCGACAATAGGAAAAGGCAGAAACAGCACAAAAANAAGAAGAAAAAAAGC
AAGNCTACAGAAGCACCAAAAGTTATGCAAAAAAAATGTTAACTAACATCGAACAAAGCA
AGGAGGGGGCAGAAAGAGATAGCACGGAAAAGAAAAATAAAAGAGATCAAGGCAAGGGAA
GATAAATAGGAAAAACAACAGATGAAACAAGAAAAGT
GenBank Accession FR818385 [GenBank]
Graphic View Graphic view of gene At5g38650
Predicted Position of Insertion Chr5:15472354 - go to primer design
BLAST e Value 1e-52
Hit Clone Code (BAC ID) MBB18
Hit Gene Code At5g38650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Proteasome maturation factor UMP1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR818385 [GenBank]


Last Updated on 10.06.2021 13:37