SimpleSearch - Line and FST details
Line specific information
| Line ID | 950D08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N491148) |
| Segregation Analysis | 50:47:37 |
| Confirmed for Hit | At5g22610 |
| Parent of DUPLO pair | 12683 |
| Parent of pair(s) | none |
Gene hit F1B16
| Sequence (A. th genome BLAST matches underlined) | >60-K114157-0022-950-D08-8409 CCTTCTCTTCTTAGTTTTCTTGACAAGGATATTTTCATTTTCACTGCATGGACCAGTCTT ATTTGATTGGTTTCATTTGTTTACCGCTATTAATAATACTAAGTGCTATTAGTAGGATGA GGTATAGGTAACTATTCATAGTGCTTTTGCTGTAGGATGCAGCATTGGCTCTTACTCTCT AACCTGCCCGGCCGC |
| GenBank Accession | HE666756 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28310353 - go to primer design |
| BLAST e Value | 2e-50 |
| Hit Clone Code (BAC ID) | F1B16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g22610
| Sequence (A. th genome BLAST matches underlined) | >60-K114158-0022-950-D08-8409 TTTTCGCCAAAACAAAATAACCGAGCCGTGTTTTCCTATACTACTTTGAGGTCGCTGAAT CCAATTATGGTGCCCTTGTGACTTCAAGTGGCAAGGTACTTTGTATAGAACTCTGTAGTT CTCATGACACTTGTTGTGCATTTGAGTGACTGTTAGAAAGACTTTTAGGTGGTGCTATGA CCGAGACTAACCTGCCCGGCCGCTAAAANCNNNNNGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGNNNNNNNNNNNNNNNNGNNNNNNGNGGGGNNNGGNNNNNNNGGGGNNGNGGNG GGGGGGGNGNNNGNNGGGGNNNNGNNNNGGGNNNGGGNNNNNNNNNGGNNGGGGGNNNNG GGGNNGGNGGGGNNNNGGGGNNGGGGGGGGGGGNGGGNGGGGGGGGGGGGGGGGGGGGGG NNGGGGGGGGGGGGGNGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGCGGG GNNGGGNNNGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGG CGGNGGGGGGGGGGGGGGGGGGGGCGGGCGCGGGGGGGGGCCCGGCGGGCGGGGGGCGGG CCGGCGGGGCGCGGCGGGCCGCGGGCGGGGCGCGGCCCGCGGCGGGCCGCTGGGGCCCCG GCGCTGGCGCCCCGGGTCGCGCTTCCTTGCGTCCTCGTGCGCTGTCCTTGTTGTGTTCTT GCTTTCTCCTTCTTTTCTCTCTCTGTTCCCTGTGTTGCTGCTCTTGTCCTCCCTCTGGTC CGGCCCCTTTCTTTTTTCCTCCGGGTCCCCGCTGTTTGTTCGGCGTCTTGTCTGTGTCTC TCTGTCGCGCTTCTTTGTCTTCTGCTTTTTCCTTTCGGCTGTTTCCTTTCTCCTTCTTTG CTTCGCCTGGCGCGTCTCTTTTGGTTGCTGGTTCCCTCTGTCTCGTCTTCCTGTCTCCCG TCTTCTGTTCTGTCCTGGGCTGGCTCCTGCGCTCTTTTGCCGCGTCCTTTTTCTCGTCCT TGTGCTCTGGTGCGTTTTGCGTTTCTTGGTTGCCTCTTTCCCTTGTCTGCTTTGGTTCTC TTCCTCTCCTCCTTGGCTTCTTTCTCCGTTCGCGTTTTTCGGTCTTGGGTCTCTGCTGCC CGCCGCGTGTCCTTGCGCCGCTGGTGCTTTCTTGTCTTCTCCGTGCGTTTGCTCTGCCTG TTCCTGTCTCGCTGCTTCGCTCGTTGCTTCTTTGTGTTTTTGCCTCTTGGCGGCTCTTCT TGCTTGGTGCTGCCGTGTGCTGTTTTCTTTTCTCTCCCG |
| GenBank Accession | HE666757 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:7516785 - go to primer design |
| BLAST e Value | 3e-64 |
| Hit Clone Code (BAC ID) | MDJ22 |
| Hit Gene Code | At5g22610 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box/RNI-like/FBD-like domains-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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