SimpleSearch - Line and FST details
Line specific information
| Line ID | 952E04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N491348) |
| Segregation Analysis | 50:49:40 |
| Confirmed for Hit | At2g43160 |
| Parent of DUPLO pair | 12838 |
| Parent of pair(s) | 9032, 9040, 83048, 83051, 83054 |
Gene hit At2g43160
| Sequence (A. th genome BLAST matches underlined) | >29-K112404-0022-952-E04-8409 CAAATTTTCCCCTACCTTTTTTATTTCAGGATTTAAGCGACTTCCCTTTAAGGATAGCCG TGATGAAAAAAGGCCATCAGACTCCCGCTCTCTTTCCGAACTCCTACCTCGTGACCCATA GTTATCAACACTTCAGCTCCTTCCCCTGTAATCGTCATCCCTATGGCCATCTCTCCCTTA CTTGAAATACAAATACCTGGAATGACGATCTCCATCCCGACTATTTTTCTTGAAATGTAA ATGGTTACAAATGAAGGTAATCTGCCTGGATCAACAATGAGAATGATGGGGGTTTTGGGA AAAAAGAGAGAGAAATTGCCCCTTTTTTTTTTTTTCTTAAAGGGAGAAGTCCCCGGCGTG GTTATTATATGAAAATACGTTTTTGTTATACAACAAAATACGAGGAGGCGGATTTTTCTG CGAAAGCGGAAAACAAATTATTCTTCTTCTGAAATCTTTATTTTGACGAGTGTGCGTTCA TATCCAAAAGGGGGGGGGCATAAAAAAGAAAAACATCGATGGTGTGGTAAAAAAAAAACC CCCCGAAAAACAAAANNNNNNGNNNNNNNNNNNNNNNNCNNNCCCTCCCCTTTCCTTCCT CTTCCGTTATTCTTTCGATCCTAGATTTACCGCGATGACTTTCGATTTATCGGTGTCCAC GTTATTCCATTATTCTTTCTACTCATATATATCTTTTTTTGATGCTATCTCGCACTCTCC TTTACAT |
| GenBank Accession | FR818611 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17950633 - go to primer design |
| BLAST e Value | 5e-50 |
| Hit Clone Code (BAC ID) | F14B2 |
| Hit Gene Code | At2g43160 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ENTH/VHS family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR818612 [GenBank] |
Gene hit At3g12250
| Sequence (A. th genome BLAST matches underlined) | >29-K112403w-0022-952-E04-8409 TTCATTGAATTTTCTCTCCATGTATAAGCCATTTCTCTTTGTGGCGTATGAATCCTTCGA GGGTGCCTAACTGCCCCATTGCCATGGCCATCTGACCCATGTAGCTCGCGACATTATCCG ATGAACTGGAACCAAGAGTTCCACTGGATAAAGTATCAGCTAACCTGCCCGGCCGCTATT CTTTTTCTCCCTTTTGACCATCATATTCTTTGCTGATCCATGTAGATTTCCCGGACATGA AGCCATTTACAATTGACTTTTTCTCTCCATGTATAATCCATTTCCCTTTGTGTCGTATGA AACCTTCAAGGGTGCCTAACTGCCCCATTG |
| GenBank Accession | FR818610 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3908330 - go to primer design |
| BLAST e Value | 7e-62 |
| Hit Clone Code (BAC ID) | F28J15 |
| Hit Gene Code | At3g12250 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | TGACG motif-binding factor 6 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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