SimpleSearch - Line and FST details


Line specific information

 
Line ID 952G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N491375)
Segregation Analysis 50:35:21
Confirmed for Hit At4g20080
Parent of DUPLO pair none
Parent of pair(s) 3745, 3780, 67545, 96670

Gene hit At4g20080

 
Sequence (A. th genome BLAST matches underlined) 
>55-K112404-0022-952-G07-8409
TTCATGGAGACGAACAAATCACTCCACAGCTAACAAAACAGAACGTCCCTTTCAGAGACG
TTGCTCTTGGATCTCTCCAACTCAACAAACTTTTTTCTCTTTCTCCTTGTGTAGCCAAAT
CTCCCAACACAATCATCATCCTCCCTGTTATCCAACGCAACCAATAAGGACCGTCTTTTC
ATTACATTACCAATAAAAAAGGCTTCAATTGTATCATATATTCAATTGTAAATGGCTTAA
AAAAAAAGAAAATCTACATGGATCTGCTATGAGTGTGATGGTCAATATGGGGAAAAAGAA
AGAGAAAATACCAAATTTTTTTCACTTCTAAAATGTAGATGTCCACAACGTTGTTGTGAA
ATGAAAGTACATTTTGAGAAAAAGACAAAATACTATCCGTCGTATTTATAATGCGAAAAC
ACAAAACAAAATATTCCCATTCGGAGAACTTTATATCGACAAGTCTACATTCTCCCCCCC
AAGGGGGGGTATATAATAAAAATCACCAAAAAATGAACGCGAAATAAAAAAAAAACCANN
AANTANNNNNNNTTNNNNNNNNGNNTNNTTTTTTTTTTGTTTCACCTCTTCATCTCACAT
ACTATATACCTGAATTATTCCCACACCCCCGCATAATATACTTACCTATATACCAATCTT
TAATAACAATAACTAACTTACTATATTTAAGTTATACAACTTAACCCATAACCTCACTAT
CATCACTAATTAGTATATCAAAAGCCTATCATCACTTATATTCACAAATTAATATTTAAA
TCTGAGCTTTACCTTATAAAATACCTTAAAAAATAATATAATTATAACAATAACAGATCT
ATATATTCATCTACTTTTAATTAAACAATCTTTAGCTATTAAATACCTACTATATTCATA
ATATACACCCCATCTATACTAAATCTTCTTCAAAATACATATAAGTCTCATCTCAGTCTT
CAATCCACTAACATTAAAAAATAAATTA
GenBank Accession FR818643 [GenBank]
Graphic View Graphic view of gene At4g20080
Predicted Position of Insertion Chr4:10867495 - go to primer design
BLAST e Value 2e-58
Hit Clone Code (BAC ID) F18F4
Hit Gene Code At4g20080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR818643 [GenBank]


Last Updated on 10.06.2021 13:37