SimpleSearch - Line and FST details


Line specific information

 
Line ID 953D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N491430)
Segregation Analysis 50:42:33
Confirmed for Hit At3g49030
Parent of DUPLO pair none
Parent of pair(s) 76943, 76956, 76969, 76980, 77010, 77018, 77041, 77042

Gene hit At3g49030

 
Sequence (A. th genome BLAST matches underlined) 
>85-K104956-0022-953-E11-8409
ATCTCTTGAATTTACTATGTTGTTTTGCCCACTGCACAATGTCTAATTATCCCCTCTTCC
TATTTATAGGATGCNAATATTTGGTGACANTTTGAGGAAGAGATTCAAAAGACNNTTCNN
GGAGTAGACTTAACNNTGACTAANCAAGCTATGGGATCCTCCCTAGAGTGAGGAGGGAAA
GGAGAGGGCGAGAGAAAGGGGGAGTGGGCAAAGAAAAGAGGGACGGGGACAGAAGAGAAG
GAAAAAAGAAGAAAACCGAAGAAAGACCAGAAAAGAATAAGCCGGAGAAGAAGGAGCGGA
AAGAAAAGAAAGAGAGCAGATGGAGGAAAGACCAGAGAGAGAGGAGGATGAGAGGAATGC
CAAAGTGGAAACGAAACAAGGGAGCAGGTCAGGGGAAGGAGAGAAGTAGGACGGGGAGAA
AGAGNAGTAAANANAAAAGAGAGAAAAAGGAACTAGNAGAAGAAANGAGCACNCAACGGG
AAGGAACGGAAAAAAGNAAAGGGAAAAAGACCCGNCGGAAAAGAGACAAGGAAGAAAAAA
ACGGGNNGCGCAAGATGAGAGAAGAAGACGGACCAACAGAAAACAGTAGAAAGGAAGGGA
GGAACTAGAAGGAGGCGAAAAAAGAATTAAAGAGAAAAGAAAGAAGAGAAAGCAGAGAAA
AAAAGTAGGAGGCGAAGAGCGGAGCAAAAACAAGGAGAAAAGGAATGACGAGGAGGAAGA
AGACAACCAAG
GenBank Accession FR818694 [GenBank]
Graphic View Graphic view of gene At3g49030
Predicted Position of Insertion Chr3:18174769 - go to primer design
BLAST e Value 8e-37
Hit Clone Code (BAC ID) T2J13
Hit Gene Code At3g49030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FBD, F-box and Leucine Rich Repeat domains containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR818694 [GenBank]


Last Updated on 10.06.2021 13:37