SimpleSearch - Line and FST details


Line specific information

 
Line ID 956H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N491773)
Segregation Analysis 50:48:36
Confirmed for Hit At1g55860
Parent of DUPLO pair none
Parent of pair(s) 12260

Gene hit At1g55860

 
Sequence (A. th genome BLAST matches underlined) 
>72-K033598-022-956-H09-8409
AAAGATCCCACAGTTTCAATGCTTTAGATTCAGCTGGTTTAACTTCTACCTTTCTTGATG
CTATATCTGATGAGGTCATCTGCTCTGCAGAAGCCATAACATGCATACCGCAGTGTCTGG
ATGCTCTGTGTCTCAACAATAGCGGTCTTCAAGCTGTGAAGGACCGAAATGCCTTGAGGT
GTTTTGTGAAAATATTTACTTCTCCCTCTTATCTGAGGGCTCTTACAGGTGATACACCTG
GTTCTTTGTCAAGTGGGCTTGATGAACTCTTGAGACATCAATCTTCGTTGCGCACTTATG
GAGTTGATATGTTCATTGAAATCCTCAATTCCATGTTGATTATTGGATCTGGGATGGAGG
CCACCACCTCTAAGTCAGCTGATGTGCCCACTATGGGATCCTCCCTATAGTGAGACTAAG
GGAGACTTCCTAAAAAGAGAGGGCATCATCCATCTAGTGAGACGAGAGGAAGCTATTAAT
AATTGGAATATATTTTGATAAAAACAGAAATTCCAATCCGTCGTATTTTAAGGCGAAAGC
AATAAAGT
GenBank Accession CT955791 [GenBank]
Graphic View Graphic view of gene At1g55860
Predicted Position of Insertion Chr1:20890501 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14J16
Hit Gene Code At1g55860 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LOW protein: E3 ubiquitin ligase-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CT955790 [GenBank]


Last Updated on 10.06.2021 13:37