SimpleSearch - Line and FST details
Line specific information
| Line ID | 967G02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N492810) |
| Segregation Analysis | 50:50:34 |
| Confirmed for Hit | At2g19580 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3572, 3585 |
Gene hit At2g19580
| Sequence (A. th genome BLAST matches underlined) | >15-K101968-0022-967-G02-8409 AACCCACAATGATTCGTTGGCATAGTTGCATAACCGAATTTAGCTATGGGACCTCCCTAT AGGAGCTATGCTCTCCCATAGCGGATGGGGGGCAGGGAAGGAGCGTGGAGATGAAACCGC TCGAGAGGGAGGAAGAACGCGGGTAGAGAGACGGCGAGGTAAGGGGGGAGAAGAGAGAGG AGAAGGAAGGGGCATTGATAAAGGAATAGACGATGGATATAGTGAATGAGGAGGATAAGG GAGTGAAACAAGGAGGAGATAGGTGGAGGGGGAGAGGATTGGAGAGGAGAACGGGAAGGC GAGGTTAAGGGCGGGACAGGAGAGACATGTGTGGGAGGAGAGGGGCGAAGGATGGGGGAG CGAGGGAGAGGGACGGGAAGTGAGAAGAGGGCGGCAGGAGGGAGGGAGGAAAGGAGGGGG AGAGGTAACGTGGGGACGGGAGGAGCCGGGCCAGAGGCGGGAGGAGATGTGCAGCGAGTT GAGAGAACGAGGGAGAACGGAGGAATGCCGAGGAAGCGGAGTAATAGGGAATGTGAAGGA AGAGGAATGGAGAGAGGAGAGAATGAGCTAGTCGAGTAGAAGGGCAAGGGAGGTGAGGAG GAGAGTAAGGGGACGCAAGGAGGATGAGGTAACGAAGGTATGCGCGGGGGAGAAGATGGA CAAGAAGGAAAGTGAAGTGGGCGAACACGACGGAAGAGGGATGCAGGTTGATAGATGGCA CCGAGAAATGAAACATGGAACGAGGCATGAGATGAGGAGAAGAAGGGAGAACAAGGAAGG AGGAGAGGGGAGGCAACGATGTGGGGGGCAAGGGATATGAAGATTGGGGGGGGTAGAAAG AGGACAGAGAAGTGGAGCAAGATGAGAATTGGAGGGTGGGTGGAAGGAGGGAGAGTACAG AGCATAGCCTATGTACAGAAGGGAGGAGGAGGTAATGGGCAAGGAGAGAGAATACGCACG TGGCAGAGGAAAGAAGAAGGGGAT |
| GenBank Accession | CU458571 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:8474266 - go to primer design |
| BLAST e Value | 9e-12 |
| Hit Clone Code (BAC ID) | F3P11 |
| Hit Gene Code | At2g19580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tetraspanin2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | CU458571 [GenBank] |
Gene hit At2g40430
| Sequence (A. th genome BLAST matches underlined) | >15-K113601-0022-967-G02-8409 TTTCGGAGATGATGAACAACGTCGAGGAGGAGTGCCCGAAATACAATTATTAGTGGACTG CTTTCACCTAGAAGTGCTACAGATCCTACTTCGTCGGTTGATCAAAATGTACTTTCATTT TATAACAACGCTGCAGACATCTACATTTGTGAATTGAAAAAAAATTGGTAATTAGCTCTG TCTTTTATCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACAT GAAGCCATTTACAATTGAAAAATTAACCAAAAATTAGGAGGACCAGCCCAGCAGCTATTT ACGAAGGGTCATCGCCAAGCAGGAAGTGCTGAAGATACGTCCTCCTCGGTTGGGAAAGTA CAAGTATGAAACTAAATCCTTCTTTACATCTATACATTTCTGTTATATTTTCAAGCTTAC TAACCTGCCCGGCCG |
| GenBank Accession | HE667479 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:16880270 - go to primer design |
| BLAST e Value | 7e-65 |
| Hit Clone Code (BAC ID) | T3G21 |
| Hit Gene Code | At2g40430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Nop53 protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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