SimpleSearch - Line and FST details
Line specific information
| Line ID | 969E09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N492985) |
| Segregation Analysis | 50:50:50 |
| Confirmed for Hit | At3g10330 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 930, 58585 |
Gene hit At3g10330
| Sequence (A. th genome BLAST matches underlined) | >69-K104990-0022-969-E09-8409 ATCTGAGGATCTAATCCTGATCGTGTCCTTATTGTTGCTTTCATGACAATCGCTACCGTG GCTGATATGTTCATAAATCAAATCTATTTTTTCAAAACCAAAAAAATTTCCAACCGTCCT ATTTTTAAGCCAAAGCAATAAACCAATTTTTCTAATTCTGAAAACTTTTTTTTCACAGGT ACACTTTCCCCTCCAAAAAGGGGAAAACAAAGCCCCACAGCAGGGAAGGGGAAGAAACAA CAAAATAGCCCGACCAGAGAAAGATAATATAAACGGGACGCACGGGACGCGGAAAACAAG AAAGAAACAAGAGAGAAACACGAAAACAACAAGGTAAAGGAACGGATAAAAGGAAAAAGC CAAAGAATAAAGCAAAAAAAAAAGAAGGGGAGGAAAAGAAGGACGCGAAANGAATAAAAA AAAAAAGAGAGACAAAAAAGACCAAAAAAACGGGAGGGGAACACAAAAGAGAAGAAGAAA GAAGAAACGAGAAAGGATCAAGAAAAAGAAACGCAAGAACAGGAAAAGAAAGAGAGGGAG AAAAACACAGCCCCNCAAGCAGCGAGACAGAAAAGGAAAGAGAAGCAAACAACAACAATA GCAGAAAGAGAGACAAAAAGAAAACCAATCCCCAGGACGAGCAAGAACACGATAAAAAAA AGGCACGAAAACAACAAGACAAAACAAACGGAAAGAAACAACTAAACAGAGCCAAGCGGC ACCAACAACAACAAAAGCAAAGCAAACAAAAGAAGGAGACAAAAGACAAGACGAATATGG AAAAAAAAAGAGATACAGTAAGCCGAGGAAAAAGAACAGCCCAAGAAAGAAAAAAGAGAA ACAAAGGCCGAACAAGGCAGAATAATGAGAGACGACGGAAGACGGGATACACAGAAACGG ACAGACGGAAAGAAGCACGCGACTTCCAATGGAGAGTAAAAAATAACAAAACAGCACCAA AAAGGGGGGAAACTACCGACAAAAGAGCACACCACAAAGCAGAAACGAAACAGGACACGA GAGAGAGAGACAAAACACAGAGAACGCAACCGCAAAAAAAAGCAACCCGAGAGGGAGATA TCAAGAAGGAAACAAGACGACGCAAGCAGAGAACAAGAACAAAGAAGGAAC |
| GenBank Accession | FR819354 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3200137 - go to primer design |
| BLAST e Value | 4e-17 |
| Hit Clone Code (BAC ID) | F14P13 |
| Hit Gene Code | At3g10330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Cyclin-like family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g14230
| Sequence (A. th genome BLAST matches underlined) | >69-K033865-022-969-E09-8409 GGTACGATACATTTCCTGCGACATGAAGCCATTTACAATTGAATATATCGCGGATCACGG AATGCTCTATACCATGTATGATGGATCACCGGTCACGACTACATACAACCCAAACTGTTG TCTATAAGATTTCTTACCACGCAATATGATTTCAGACGACACTTTCAGATTTCCGACACA ACCCCAATTCCTACACATACACTACACAATAGTATAAGATTTCTGACAACAGAAAGAGCA CATAAGATTTACTTCAGTAAATATCTTGTTCTTGGCATGAACAGAAAGTCCACCTGATCC AGTGCTCTCCGGATTGTCCCCTGAACCCATATGAGACTCTTCCTCTTCAATCCTATGGGA CCCTTGCTAGAATGAGTCCTCTGACTTCTCATTGATGAAGCTTCCATCCGCTTTTCTGTG TGTCTCATCTAGCAGCTCAAGGAAATCAGGAGTTTTTTCTCCAGTCTTCTCACACTGAAA CACAAAGAGATAAACAAGATGTCAGTATGTAATTCTAGATTAAG |
| GenBank Accession | CU458667 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:6028198 - go to primer design |
| BLAST e Value | 9e-155 |
| Hit Clone Code (BAC ID) | F15N24 |
| Hit Gene Code | At2g14230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | CU458666 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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