SimpleSearch - Line and FST details
Line specific information
| Line ID | 970F11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N493095) |
| Segregation Analysis | 50:45:45 |
| Confirmed for Hit | At3g10200 |
| Parent of DUPLO pair | 2746 |
| Parent of pair(s) | none |
Gene hit At3g10200
| Sequence (A. th genome BLAST matches underlined) | >86-K113777-0022-970-F11-8409 TCTACTTTATTGCTTATTGCTTTCTGCAACTTCTAGGACAGAACCTACTTTGTCAGTTGT ACCAAAATGTACTGTCACTATATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAA AAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCCA TGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCTCTGCTTAAGACA AACCTCCTTCTCTTCTTTAATCCATATTGCAGTCTGTACCTTCCGGGAAATAAGCTTCCA GCACATTGCACTAACCTGCCCGGCCG |
| GenBank Accession | HE667570 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3159260 - go to primer design |
| BLAST e Value | 5e-41 |
| Hit Clone Code (BAC ID) | F14P13 |
| Hit Gene Code | At3g10200 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | CU458709 [GenBank] CU458709 [GenBank] |
Gene hit At2g24520
| Sequence (A. th genome BLAST matches underlined) | >86-K102025-0022-970-F11-8409 AGATTTCCGGACATGAGCCTTTACAATTGAATATATCTATGGGATCCTCCCTATAGTGAC CCTAGGACTTCAACGAAATAAGATATCACATATATTCTGCCACATTACATCGCATAATCT AGCAGTGGGAGGCCGAATTAAATCTAATTTGTAAACTATATGAGCACGTGCTAAACCCTT TTAATGCTGTCGTAGGAATATAAGGAAACTGTGGGGGGGAAGATTATAGACGACATATAC CAACGGGTTGTCTCAAAGAGGTAGGAGGGCGAGCGGAGACGATATCAAAGAGAAACAACA GATAATAAGAAGTATTTTTGGAGGAGCGAAGCAGAACAACCAGAAGAAAGTGACACCCCT AAGTCGAGGGAGAGGAGCTGAGGAAGACGCCATTACCGCTTGGGGCTCGGAAGACGCGGG CTACAAGTAACAAACCGTTGAGGAAGGAGAAGACATAACAGAAGCAGGTAGAGGGGAGAG AACGAGAAGTTGAGGATGGCGTGAGGATGGAATGGGGACGTAAAGGTTTAGAATAACCGA CGGGAGACAGACGAATAGAACGAAGGTCAAAATAGCAGATGAGAGCATACGTGGTTAGAT GCGGAAGAAGAGGAAAGAACAGGATGGGACACCAGAAACATATAATGTGATAATAGGACA GTCGCCCAACAGGTGGCGACGGAGCATAAGGTGCGCGACGAAGTATGGCAGTAGGAGGAA TAAAGAAGCACTAGCAGAGATACAATAACGACACAGTAAATACAACATAGTAGCACAGAA AATCAACTTATACAGACGACAAAACGAAGAGTTAAAATTCGGGAGGCCGCGGGGGAAATA GACAGGAAAGTGGCGCTAAGATGAGAGGTAAGTACAGACAACGACGAGAGTAGACAGAAC GACAATGCTAGGCTAGAAAACACAAGAGAAGAAGGACACTGTGGAAGAGAGGACGATGAA AACA |
| GenBank Accession | FR819375 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10419646 - go to primer design |
| BLAST e Value | 9e-06 |
| Hit Clone Code (BAC ID) | F25P17 |
| Hit Gene Code | At2g24520 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | plasma membrane H -ATPase |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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