SimpleSearch - Line and FST details
Line specific information
| Line ID | 971B10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N493142) |
| Segregation Analysis | 50:49:47 |
| Confirmed for Hit | At2g29360 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 72189, 72202, 72214, 72223, 72231, 72239, 72247, 72254, 72260, 72265, 72269, 72273, 72274, 72275 |
Gene hit At2g29360
| Sequence (A. th genome BLAST matches underlined) | >74-K113655-0022-971-B10-8409 ACGTGTTGGAGAACTAAATGATGTATCATCGCTCGTGGCATTTCTTTGTCATCCTGCAGC TTCGTATATTAGAGGTTTTAGCATTTGTGTTGATGGATGTTTCACTGTTAATGGTTTCTC TTTCGAGCCTCTGCCTTAAGACGTCGATTGTTTTCATTTTACGTTATTTTTTTAACATTT ACAATTTGTTTAGATATGTAAACATAAACACAATTACACAAACAAACAAAAAAAATTGGC GTTTGGAATGTAATCCAACTCTCCACAATATATGCATGCTTTGTGTTTTAACCGATCAAG TATACTAATTTTTTTTTAATTATAGTATAATTTGTTACTACGAAGCCACCAACGTTCTTA CATTCTCAAGACATTGATAAGTTATAACCTGCGGTCCTAAATCACCCACCAAAGGGGAGA GATGAATTGATAAATTAAGACGAGATGTGTTGAATGTTGATAGAGCTAACCTGCCCGGCC G |
| GenBank Accession | HE667613 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:12604932 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F16P2 |
| Hit Gene Code | At2g29360 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAD(P)-binding Rossmann-fold superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g20010
| Sequence (A. th genome BLAST matches underlined) | >74-K113656-0022-971-B10-8409 TCCATTAAAAAAACCGCGGCGGAAAACATCATTTTTGAATTGAAAAAAAAATGGGGAATA CTCCTTCTTTTTCTCCCAATTGGACATCATANTCACTGTAAACGCNNNGCGAATCNCACG GGGAGAAGACTTTGATTATGATCATCNNTTCGCAAATTAACATGNAAAGACGAANGACAA NCNTCTCACCTTTCGGGCTATAGCGGTANTTATTCAAACTCATAGAAGTCCAGTGTGTCG TTTTTGTTTGGTTAGGTGATACAATTAAGAACTTAGCCTAGAATGTCTGGACGTGATCTT TGTTTTGCTAGGCCAGGGATGTTAATTGGCCTTACATGATGCGCAAGAGTCGCTTTTATC TTTTCAAAAATAAAAACAAGTGCGATCACAGCAATTTGCCGTCATAACAAACCTGCCCGG CCGCTAAAGTAGGATTGAGAAGGAAGGACAGGGGAGCAAGCGACAGAAGAACAACAGGGG GGAACGAAACGGCGAAGAAGACAGACGCACAAGGGAGGCAAGCAGGAAGAGAAGAAGGAG GACGAGTATAGGAAGCAACAGATATCACGTAAAAAAGAAGCGGAAAGCGGACACACGGGC GAACACCGGGGGATAAGATAAAGAAACAAG |
| GenBank Accession | HE667614 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:10841949 - go to primer design |
| BLAST e Value | 5e-17 |
| Hit Clone Code (BAC ID) | F18F4 |
| Hit Gene Code | At4g20010 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | plastid transcriptionally active 9 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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