SimpleSearch - Line and FST details
Line specific information
| Line ID | 973D11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N493359) |
| Segregation Analysis | 50:48:48 |
| Confirmed for Hit | At3g13530 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12666 |
| Note |
Gene hit At3g13530
| Sequence (A. th genome BLAST matches underlined) | >84-K112304-0022-973-D11-8409 AGCCTTTCATTGAATATATCCTGTCCTGACTGGATTCCCAGTTAGAAGGTCAACCTGACA TTACTTCCGTTACAAGCAATGGTGGAAGAGTAAAGTGCATGGTGACGGTGTTCGGCATTC TGAATCTCACCGAGGACTCCTTCTTCGATGAGAGCCGGCGGCTAAACTGCCCGGCCGCTA GAGGCGCCCTCTGCCATCTTCTGAAGCTTATCTGTCGATGTCCTATTGGCGGAAAGAGAT ATTCGATGCTGTTGTCTAACATCTTCTGTGCCAGATGTTGAGGCATCTGGTGCAACACTG CTCACTCTAACCTGCCCGGCCGCTATTGCTTGTGTGTCCCTTTCCTGTGT |
| GenBank Accession | FR819593 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:4413738 - go to primer design |
| BLAST e Value | 1e-60 |
| Hit Clone Code (BAC ID) | MRP15 |
| Hit Gene Code | At3g13530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | mitogen-activated protein kinase kinase kinase 7 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g38430
| Sequence (A. th genome BLAST matches underlined) | >84-K112305-0022-973-D11-8409 CCTACCTGCCCGGCCGCTAGATTCCCANTTAAGAAGGTCAACACTGACATTACTTCCATT ACAAGCAATGGTGGAAGAGTAAAGTGCATGGTGACGGTGTTCGGCATTCTGAATCTCACC GAGGACTCCTTCTTCGATGAGAGCCGGCGACTAACCTGCCCGGCCGCTAAAGGCNCCTTT TGCCAGCGTCGGAAGCTTATCTGTCCAAGTCGCGGTGGAGGTGAGAGATATTCCATGCTG TTGTCTAACCTCTCAAAAACAAAAAAAAAAGCATCTGGTGCAACACTGCTTACCCTAACC TGCCCGGCCGCTATTGCTNGTGTGACATTACCGATGATAAAAAAATGTCTTCATAATCAA ACCCTACATCTGAGTTCTTCTTTGCTTAGATGGTCTTTTCTTTATCCTACTAAAAAATAA TAAACGTGGGATAATTTAATATGTTGCTTTTTGTTTTTTTCTACCCCTGCTTTTTTTCCA TTTTCCATTTAACTAGCACAGGGACGGGCATATTCTTCTCTTATCCTATTATCATTTAAT TCTTTTTATTCATACTTCTTTGGTTTGTCTCTTAATTATTTCTTTACTTTACCCGTTGTT ATTTTTATTACTTTATTTATTTTTCAAATTATTTTTACCCATATTTACGATCACTCCTAT TTTGTTGCCCTTTTGTTTTATTTCTTTTTTTGTCTCTCTTCAGCTTATTTCATCTAATTA TATTTTATCTTTATCCTTTCTTTCTTCGTTATATTGTTTATTTTTGTTTCTCAGCGATTT TTCATTTCTTTTATTACTTTACACGACGAGGATATAATAATTTCCTCATCTACTTCTCCT CTCACTTTTCATTTTCTCTTTGCTGCTTTAACTGCTTATCATTTTATTCGTATTTACAAT TTTATGTGTATTTACCTCATCAACTTATTTTTTATTATTTTTTATCTCTTATTGTCTAAT TTGTTAATATTCTCCATTCTCCTTGATTTTTTTAATCCCCTGTCTATATTTTTCGTCGTT TATTTATCTTCATTAGTATTCTTACGCGGTCTATCGTTATTATTATTCTCTTTCTAAGTG ATCTTTTTTTTTTCGGACTTTGCCGTTTATTATTGTATTCTTAATTACTCCGTTATAATT ATCAATTTCATCCTTTTTGCTTTTTATTTAATGCTTTTTTCTAATTTACACTTATGTCCT CTATCGCTTATATTAATTCGCCAACCCGTCTTCTTTATTATCATTATCTTTCTCT |
| GenBank Accession | FR819594 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:15385053 - go to primer design |
| BLAST e Value | 9e-06 |
| Hit Clone Code (BAC ID) | MXI10 |
| Hit Gene Code | At5g38430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ribulose bisphosphate carboxylase (small chain) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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