Sequences from confirmation amplicon


Confirmation sequences for line SALK_026688c and hit At2g39690 are shown.
Line ID SALK_026688c
Locus At2g39690 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:16543297
Primers used for PCR 45et - LBb3, show primer details
   
Sequence Name 57-K111283-SALK_026688C-45et
GenBank Accession LN485661 [GenBank]
Sequencing primer gene specific primer, 45et: 5'-TTTTAAACCTAATGATGCCCTTTG-3'
Sequence (A. th genome BLAST matches underlined)
>57-K111283-SALK_026688C-45et
CATAGTCCTCACGCTTTGGCGATTGAACATTTCGTCTTGCGGCATCCTTGTGAACCAGAA
GATGTAAGTGCATTCCATCTTATTTCATTCCAATAAATATAATCAAATACCACAAGAAGC
TAATCAACATCTTCATGAAAGAAGGACTCGCTTGACGAGAAAGAAACGCTCCTTCGTCAC
ACTTACGGTTTAGGATATTCAGAGCCCAATGTGACATTTGCACTTTGCCGTGGAAGTTGG
TCTTCACCAGCAGTGAGTGGACAAAACATAGTTTTATCATGACGAATGTATATCACTCAA
ATGTACTTATAGATGATGAAATTGATATGCTTGTGCAGCTAAGAGTCTATACAGCAGATG
AAGTGGTGAATGATTTAGGAAGAGCAAGAGTGGAATATCTAGAAGCTTCTGTGGGTGTTT
CAAGCAAGAAAAAGATTGTGGTTCCACAGCTTCTGCAATGGCACATGAAAGATTTTGCAG
ATGATATTGAATCTCTTTTGGAATGGATCTATAGCCAGTTGCCTCGATCAGGGAACCTAA
AGGGCATGATTATGGAATGTCTAAAGAGAAAAGCAAAAGTTCCTTTAGCTAAAATTGTAG
AGATTCAAACATATGGACACGAATTTCGTTACTTGTTGTCATTGTAAACATGAGAGGTCC
TTATCTAGAATAGAATATCGCGGACAACTTGACGCTTAGACAACTTAATAACACATTGCG
GACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGAT
TGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCA
GCAGGCGAAAATCCTGTTTGATGGTGGTTCCG
   
Sequence Name 41-K111282-SALK_026688C-R210
GenBank Accession LN485311 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>41-K111282-SALK_026688C-R210
GCGATATTCTATTCTAGATAGGACCTCTCATGTTTACAATGACAACAAGTAACGAAATTC
GTGTCCATATGTTTGAATCTCTACAATTTTAGCTAAAGGAACTTTTGCTTTTCTCTTTAG
ACATTCCATAATCATGCCCTTTAGGTTCCCTGATCGAGGCAACTGGCTATAGATCCATTC
CAAAAGAGATTCAATATCATCTGCAAAATCTTTCATGTGCCATTGCAGAAGCTGTGGAAC
CACAATCTTTTTCTTGCTTGAAACACCCACAGAAGCTTCTAGATATTCCACTCTTGCTCT
TCCTAAATCATTCACCACTTCATCTGCTGTATAGACTCTTAGCTGCACAAGCATATCAAT
TTCATCATCTATAAGTACATTTGAGTGATATACATTCGTCATGATAAAACTATGTTTTGT
CCACTCACTGCTGGTGAAGACCAACTTCCACGGCAAAGTGCAAATGTCACATTGGGCTCT
GAATATCCTAAACCGTAAGTGTGACGAAGGAGCGTTTCTTTCTCGTCAAGCGAGTCCTTC
TTTCATGAAGATGTTGATTAGCTTCTTGTGGTATTTGATTATATTTATTGGAATGAAATA
AGATGGAATGCACTTACATCTTCTGGTTCACAAGGATGCCGCAAGACGAAATGTTCAATC
GCCAAAGCGTTGAGGACTATGCCACCTACGTTGAGTGAAGCCTGCCAGTACATTACAAAG
GGCATCATTAGG

Last Updated on 06.12.2018 16:11